LOCUS ABA57740.1 454 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 quinol:cytochrome c oxidoreductase
quinone-binding subunit 1 protein.
ACCESSION CP000127-1184
PROTEIN_ID ABA57740.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1239"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR005614"
BEGIN
1 MSSRYPSNVG STLDKKPPPG AVVTDKVSGL VLAPHRRWWW LGAFGFSALL SLLFFSAIGY
61 LLVTGVGIWG INIPVAWAFA ITNYVWWIGI GMAGTFISAA LLLTRQKWRA SINRSAETMT
121 VFAVSISGLF PILHLGRPWF FYWLAPYPDI MNVWPQWRSV LVWDFFAILA YLVVSLLFWY
181 TGMVPDFAVI RDRARKRSQQ IFYGLLALGW RGEARHWRRL ETATLLLAGM AVPLVFSVHS
241 MVGLDFAEGI VPGWHSTIFP PFFVAGALFS GFAMVLMLVV PLRSVFGLHA FITSQHLNNM
301 AKLLLATSLI VTYSYIMEVF IAWYSADPYE IAMTQNRMSG AYAPVYWATI FCNVLVPQIL
361 WFKRIRLNPI ALFVVGTVVF IGMWLERLML IVTSLYRDFL PSAWGMFYPT VWDWIFLFAP
421 IGFFAMLFLL FIRFAPVTSM FEIRKLRSEV KNHE
//