LOCUS ABA57739.1 993 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 quinol:cytochrome c oxidoreductase
iron-sulfur protein precursor protein.
ACCESSION CP000127-1183
PROTEIN_ID ABA57739.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1238"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR006311"
BEGIN
1 MAGSSIKPLD LAPIRARLAE AQGRAFWKSL EELAGSEEFE RFLYQEFPFF RELSQASLSR
61 RDFMRLMGAS LALAGLSACS TPPPEEILPY IRAPEGLVPG ESLFFATAMP LDGFATGVLV
121 ESRMGRPTKV EGNPLHPASL GGTDIFAQAS VLQLWDPDRA QVISHRGEIS TWQTFLAAMG
181 EKMRTFEGNQ GKGLYLLTPT VSSPTLISQL RTLGKRFPHA HWHQYQPINQ DNSYEGARLA
241 FGESLETRYH LERAEVILSL DGDFLGSLPG HLRYARDFAK KRRVDSAQST MNRLYVAESS
301 PTITGTMADH GVSLRASQIE VLALQLARAL GIGVPRREET ASDLPEQWVR AVAEDLRQHR
361 GTSLVITGEK QPPFVHGLVH AVNQALGNVG TTLTYSAPRA FNPRNQNESL NHLVAQMDAG
421 KVDTLIMLGG NPAYNAPADL AFSKQLAKVK SSIYLGLYED ETAAHSHWHI PETHYLERWG
481 DARAYEGTVS LLQPLIAPLY QGKSDYELLA VLLGQTDRSD YDWVRGYWQK QWPKSDFKSI
541 WNQALQAGFI EGTALRSKSV KLRDDWVAHL SRGQSKSKET SGMEIIFMPD PTIWDGQFTN
601 NGWLQELPKP LTKLTWDNAA LISPRTAENL GLANEEVVAL RYQERQVQAP IWIMPGHPEG
661 AVTVTLGYGR AKTGQVGAGT GFNAYALRSS RAPWFGWGLE IVKTGKHHSL ATTQHHHSME
721 GRDIVRTATL SEFRENPHFA QQELPSKSLY PQFNYSGYAW GMTINQSTCI GCSACVVACQ
781 AENNIPVVGK EQVSLGREMH WLRIDRYYSG GLDDPRTYFQ PVLCMHCENA PCELVCPTAA
841 TVHDSEGLNL QVYNRCIGTR FCSNNCPYKV RRFNFLEYAK ETPSLVAQKN PEVTVRMRGV
901 MEKCSYCIQR ISNARIQAEL EERRIQDGEV LTACQAACPT EAIVFGDLND PESQVGQVKA
961 SPLNYALLGE LNTRPRTTYL AKLTNPNPKL KEE
//