LOCUS ABA57705.1 547 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Restriction modification
system DNA specificity domain protein.
ACCESSION CP000127-1149
PROTEIN_ID ABA57705.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1204"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000055"
BEGIN
1 MQTSQPTGWV FCRFGDIARI RNGYAFRSSA FKKTKTHDCD VPLIRQSQLI GTAVNIGEAV
61 YLPAEYLERF AQYVINKGDI LIGMSGAIGK VCRYKNGFPA LQNQRTGKIE VFDESQMDSR
121 FFGLYLSSIE GELIRQAKGM AVQNISAKDI EALPLGLPPY NEQQRIVAKI EELFSELDKG
181 IESLKTAREQ LKVYRQAVLK HAFEGKLTAQ WREENKDKLE SPEQLLARIQ QEREARYQQQ
241 LEEWKAAVKA WEATGKEGKK PGKPKKSLAI KINSFKIPKN FPNGWISIQL RELFESTQNG
301 LAKRQGTSGK PIPVIRLADI KNQEVDSSDL RSIKLDATEI QKYELSRNDL LCIRVNGSPN
361 LVGRMILFKH DNVMAYCDHF IRFRFPQGIV LPSYIQMLFD TQTVRRYIEL NKVSSAGQNT
421 VSQTTISALA IPYCSLMEQK IIVSRLEEQL TSISAVKVEI EENFQRLKSL RQSILKKAFS
481 GQLVPQDPKD EPASKLLERI RAEKEKIPHP TRRTRKPTAS RNPSRKTGIK ERSDEALMGR
541 SSIKERR
//