LOCUS ABA57497.1 1146 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 DNA helicase/exodeoxyribonuclease
V, subunit A protein.
ACCESSION CP000127-941
PROTEIN_ID ABA57497.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0988"
/EC_number="3.1.11.5"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000212"
BEGIN
1 MINPSIPDAD ARRQALNPHG SFIVQAPAGS GKTELLTQRY LMLLARVEAP EEIVAITFTR
61 KAAAEMRYRI IAALASAKEN QPPKTEPAKT TWDLACAVRR RDEGKGWSLE DHPARLRIQT
121 IDSLCASLTR QMPLLSRFGA QPGITEDAER LYRQAAHRTL AEVESGAEWS ASVETLLRHL
181 NNNWGKIERL LSAMLARRDQ WLRHLAGDEQ LQREILEEAL QGVIQDGLKR ASRYCPESML
241 AEILELARFA ASNVAATAPA SPIQACRDLW NWPGIQAEAL PHWLGLAQLL LTDEGEWRQQ
301 ANKNIGFPAP SAARGQEERQ FLKEQKRALL DCLARLEGEE ALRRALHGLR FLPSASYTAA
361 QWQLMEALFQ LLPLAVAQLQ LVFQEQGEVD FTEVAQRAVV ALGEAEAPTD LALALDYQIR
421 HLLMDEFQDT SLSQYILLER LTLGWEAGEG RTLLVVGDPM QSIYRFREAE VGLYLQAWWQ
481 GVGLLPLTPL TLSVNFRSQQ GIVDWVNQSF RQILPVAQEI ATGAVPYSQS HAFHPPLMAP
541 AVQIHPFFEK GSLAEAKRVV HLVQQTRQAA PNSTIAILVR SRGHLAGIVP LLREAGVGFR
601 ALEIEPLGSR PIVQDLLALT KALFHLGDRL SWLTVLRAPW CGLTLADLYV LAGEDKQAAV
661 WDRIQEDACI QGLSEEGRER LGRLRQVFAK ALGERRRTSP RRQVEGVWLA LGGPACVTDS
721 IALEEASVYL DLLEREAVAG EILDFRALEE SVAQLFAPPD KEADETLQIM TIHRAKGLEF
781 DTVIVPGLGR PPRHESHQLL LWAERPTVHY PTGDDGALLL APISGAGRSQ DSIYQYIKRL
841 HEEKGEFENG RLLYVAVTRA KHRLHLFGQV DLDDTGKPKV PSKHSLLASL WPAVKGKFEA
901 TALLQRETEN REEGRDPGDS SISGFISRLS TQWQCPAPIA GVKADIEVLP EAASALDPIE
961 FDWAGETARH IGTVVHRYLQ IIAGEGPEHW SLARITALAP ALRQALMQQG VMPNEMENAI
1021 ERAREVLRQT LEDPRGRWIL ASNYRQARNE YSLSGVLNGR IIRAVIDRTF IDEAGVRWIV
1081 DYKTGVHEGG GREEFLNREQ ERYHPQLERY AALMALKVPG TEKIRLGLYY PQIGGWREWE
1141 WSKKIF
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