LOCUS ABA57455.1 661 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Cytochrome c-type biogenesis
protein CcmF protein.
ACCESSION CP000127-899
PROTEIN_ID ABA57455.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0943"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR002541"
/db_xref="InterPro:IPR003567"
/db_xref="InterPro:IPR003568"
BEGIN
1 MTPELGQLAL ILALTLAFSQ AILPLIGAQR GIIGWMNVAR TAAYGQCFFL IVAFTCLAIS
61 FLNNDFSVAY VANNSNSALP PAYRFAAIWG SHEGSLLLWS LTLGLWTVAV ALFSRSIPLA
121 YVARVLAVMG MVNVGFLLFM LLTSNPFLRL FPAPLDGQDL NPLLQDPGLV MHPPMLYMGY
181 VGFSVAFSFA IAALIGKRLD AAWARWSRPW TVVAWLFLSI GITLGSWWAY YELGWGGWWF
241 WDPVENASFM PWLVGTALIH SLAVTEKRDA FKRWTVLLAI FTFSLSLLGT FIVRSGVLTS
301 VHAFATDPTR GVFILILLGL AVGGSLLLYA VRVPQVQDTG RFHLLSREGL LLANNVVLIV
361 AAGSVLLGTL YPLVLEGLGL GKISVGPPYF DTVFVPLMVI LAFLLGAGPL SRWKQQSLGE
421 LVKKLGFIFA ISLTIGILVP YIVDKGDIFS AAAGLTVAIW VALTTLLGLW NRLRNRGGIV
481 AGARSLSRSF IGMSLAHTGF AVAIVGVTLT TIYGQDRDVG VTVGETAELG AYEFRLDKIH
541 EVDGPNYRAI EGTISVFKGE DLITTLHPQK RIYLVQTSPM TEAGIDAGLF RDLFVALGES
601 LGSNTWSLRI QFKPFVRWIW LGGLLMALGG AVAASDRRYR VSVQKMRFKL NPPKPEAAAE
661 I
//