LOCUS ABA57432.1 1622 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Superfamily I DNA and
RNA helicases and helicase subunits-like protein protein.
ACCESSION CP000127-876
PROTEIN_ID ABA57432.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0920"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
BEGIN
1 MNTSHLLVND QPVGHPANQK VVRLIHYLTR LASLRSKLIR DLTEYEKILW ISDVPHEHGC
61 FTRAWGQEEE KELDEWLAVQ NRREPELPII PEQCKEWVNQ ATLREKDRLP ELLPEIIRQS
121 QDPDGRKELD RPATISMTER LEEHPGVQQA WNRYLENKWL PWMEEHNIWE QIHKVYSALF
181 AIHQAQLRLG EEYELVLGLG LLTWQTPTGQ HVRRHLVVAN ALLEFEARLG KFTVRPYTES
241 VELRPELDML DIEERPAHAE ETAKSSLSGA EDDPWAKERI DSVLQALVHS INSQGTYDDS
301 LEMKNIRASA RPVVEYAPAL ILRKRSTKGL SEILGRIKKQ IESDENVPSE FADLAEISAR
361 DERELDNDGL EGLRATFNGE VYFPKPSNDE QRRIIDKLRS ANGVLVQGPP GTGKSHTIAN
421 LICHLLATGQ RTLITAKTPR ALKVLEELVP GGLRPLCINL LGDGPEERRS LEASVGGILR
481 KSEEWEEEDA ERQREELETR LQELREEKAK INRRLHDIRE AETHPQSVAE GTYRGTAARI
541 AESVNKNRST FGWFTDSVPL DKTLQISEID LREILMALRH FTPEKREELN LAWPDSVPSS
601 ERFVQLVQNE AKASEEERRL ADRADDHVAD LLANHSSATI ENIRDALARF RDTRRKLIMA
661 SHSWMKEALR DILSGNSALW RELFRVTDHA ISEVEGLVAI ADNTSIEFLE SIDIRVLRED
721 ARKLKEHMES GGKLGWGPLR SKRVKERLYV IKSVKVDGRS CSTIEHFSIL AAVLHVYIEC
781 EKAWGFWAGQ GDKSQEPYVL QLTMLKSLRG ALEEALSLQG IIDKCRKAVQ ECPALDEPSW
841 NDESKIERII ASCRLALARI SKQLAAAELQ GIETPISRIA AGGNAHPVTI HVLHAIRDRE
901 RDGFAQCMSK IQDLEKQYQY LLKRDEDLSK LRQLLPQLAD CLERTCNEPY WEERVRHIGN
961 AWHWAQARYW IGDYIRREDV PALGKRVKQI DDTINDIIAK LASLHAWSFC FSRLTESHRR
1021 HMEAWQQSMR RLGKGTGKHA PRHRREAQGH LNECREAVPA WVMPLHRVWD TVSPTPGMFD
1081 VIIVDEASQC GLEALPLLYL GKKVVIVGDD KQISPESGFV GKEAMFQLME QFLYDFQYKD
1141 YFHHDASLFD HGKLRYGTRR ITLREHFRCM PEIIRFSNDL CYSDTPLIPL RQYSSNRLPP
1201 LEHVFVTGGY CEGSKNRTIN RPEANAIVTR IAELCKDSRY DHKSMGVVVL QGEAQAYLIE
1261 NQLAKRLGPE EMERRRLVCG NPYSFQGDER DIMFLSLVAA ANKRIGPLTK AADERRFNVA
1321 ASRARDKMIL FHSVTFEDLS ASCLRRRLLE FFANTQPQQI AGIERDELER RAAQDNRRIV
1381 NPPAPFDSWF EVDVALELLR KEFRILPQHE VAGRRIDLVV EGGQARLAVE CDGDHWHGAD
1441 RYEADMQRQR QLERCGWEFF RVRESAFYAN KDDALASLWR MLEEREIFPI SQCVDLTPKV
1501 NMEEEGYNKS DSDASAADHA SYSLNNVEKS IHPSGRRSEE ITPSEIEDAI LQALSKRPNQ
1561 SCTLDSLTAR VLKEIGVSTR GKPREKFERR TLQGVNLLKR RGRIETYKAK NQRLRLIHQE
1621 KT
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