LOCUS ABA57416.1 749 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 glycogen branching enzyme protein.
ACCESSION CP000127-860
PROTEIN_ID ABA57416.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0904"
/EC_number="2.4.1.18"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR004193"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006407"
/db_xref="InterPro:IPR006589"
BEGIN
1 MTNSQYSPQP MAAEFSEAME KLVNACYSDP FRVLGPHPYQ KGIVVRAYLP HAIQAWIGTE
61 PPQEMARSSA INLFEWHGKA KALPLPYQVL WEDKMGFTHY EYDPYCFPPQ LSDYDLHLFG
121 EGKHWHVYRI LGSHPVIVDG TSGVLFATWA PEAERVSIVG DFNRWDGRCH PMQLRGLTGV
181 WELFIPGLKP GTLYKYELRN RNRGSIHLKS DPYGQRFEQR PHTASIVAAK TNYLWQDRKW
241 MEQRKQFDWL HQPISVYEVH LGSWQRGENG AFLNYRQLAR QLVDYVLKTG FTHIELLPVT
301 EHPLDASWGY QTTGYFAPTS RFGSPDEFRY FVDHCHLHGI GVLMDWVPGH FPKDAHGLAQ
361 FDGSALYEHE DPRLGEHRDW GTLIFNYGRH EVRNFLLSSA LYWLEEFHID GLRVDAVASM
421 LYLDYSRQEG DWIPNKYGGR ENLEAIDFLR ELNKVLHAQH PGVLVIAEES TSWPMVSHPI
481 YVGGLGFSMK WNMGWMNDTL SYMSKDPIYR HYHHDALTFG LLYAFNENFM LPLSHDEVVH
541 GKQSLLYKMP GDEWQRFANL RLLYTMMFTY PGKKLLFMGC EFGQGEEWNE SRSLDWYLLN
601 YPVHQGVQAA IKDLNHLYRS LPALNYYDFA KEGFEWIDCH DSAQSVLSYL RLKDGDFVIV
661 VLNFTPVPRT NYRLGVPKSG VYLECFNSDS TYYGGSNMGN SQTIQTDSIT WMGRPYSINI
721 TVPPLAGIVL RLKTPASKMP ATAPLSPGK
//