LOCUS ABA57329.1 766 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 Outer membrane protein protein.
ACCESSION CP000127-773
PROTEIN_ID ABA57329.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0816"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000184"
/db_xref="InterPro:IPR010827"
BEGIN
1 MSLKFVKKPI AVAIVALILI GQVLAAEFQE FIVKDIRVEG LQRISAGTVF NYLPVKVGDT
61 IDSQRVKDTI RGLFRTRFFK DVRVEREGNV LVVVVVERPT ITSIQFVGNK ELKGDQLSQA
121 LKQVGFAEGR VFDRALLEKV ELELQRQYFS RGKYGVKIDT TVTPLARNQV GVTVNIKEGA
181 IAKIGGINII GNHAFSEDEL LGAFQLSTSN WLSFFTHDDQ YSRQKLAADL EALRSYYLDR
241 GYINFNIDST QVSITPDKKR VFITVNVTEG DRYQIGEVKL AGDLVLPHEK LFDALTVASG
301 KVFSRKAIAE STTHITDLLG NKGYAFANVN AVPEINEEEK KVNLTFFVDP GKRAYVRRVN
361 ISGNTKTRDE VLRREIRQQE GGWVATELIN RSRLRIQRLG YFEDVNVETV PVPGTTDQVD
421 VNFSVVERPS GSLSAGLGFS QSQGFIFNAS ITQRNFLGSG KHVSFAFNNS QVNTIYSFGY
481 TNPYYTIDGI SRGFNLFYRE TSPFRANIAR FSTDAYGGDM HFGIPVTEND RVRLGFGYQH
541 TKVNLTENSP QEYHKFVDSE GNKFDTFNTN LGWSRDSRNN ALLTTDGSIQ SLFGEITLPL
601 GSLQFFKFGY RHRWFHPLSK SLTLMLNGDV AYGNAYGNTE EFPFFENFFA GGIHSVRGFK
661 ANTLGPKASD GTTLGGNFKM TGTIEVFFPV PFAEELKSVR LGTFIDAGNV YGIDQDISLQ
721 GLRYSAGISA NWLSPFGSLQ FSFAKAFNVQ PNDRPEVFQF SLGTSF
//