LOCUS ABA57175.1 760 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 helicase, DEAD/DEAH box
family protein.
ACCESSION CP000127-619
PROTEIN_ID ABA57175.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0656"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001410"
/db_xref="InterPro:IPR001650"
BEGIN
1 MNEYNTNVSI FINLDIDEEL SAEEYELYAD QVVDQATAAE TIPELEAEIL ILKDLEHQAL
61 GVVQSGNDKK WEELSHLLQD RPEMYTESGS RRKLIIFTEH KDTLNYLVGR IRGMLGNPEA
121 VITIHGGVNR DDRRKAQEEF RNNRDVQVLV ATDAAGEGVN LQNANLMVNY DLPWNPNRLE
181 QRFGRIHRIG QTEVCHLWNL IASETREGEV FQRLFDKIEI EKKALGGKVF DILGEVFEGK
241 SLKDLLVEAI RSSESDEARH AYQESFFGKA LDTEHLKEIL RRNALVEQHM SLEDLYAVKE
301 EMEKAEARKL QPYFIRAFFT EAFQNLTGEM RPREAGRYEV RHVPASIRER DRIIGESRTP
361 VLKKYERICF EKDLVRAHGK PMADLIHPGH PLMHATTDLI LSAHRSKLKQ GAVLVDSNDD
421 GLEPRILFMV DHSVREAPAN DQHDKPRVAS RRLQFVEIDQ HGKAFHAGWA PHLDLQPIDD
481 YDLKLVQDIL NAPWISADLE GLALNHASQH LVPEHYREVK ARREHQADKV LAAVNERLVK
541 EINYWSDRYI KLSDDVAAGK QPRMQPEMAR RRVDELTERL NQRKRELEAM KAVVSSTPVV
601 IGGALVIPQG LLAQRKGETA FCADAEARAR IEMVAMNAVI AVEQGFGHEV KDMSAEKCGW
661 DVTARPPANP DGSIKPDRHI EVKGRAKGQS TITVSRNEII YALNQTDKFL LAVVIVDGDS
721 FDGPHYIRNP FSTEPDFGVA SINYDLSDLL SKAVSPELTL
//