LOCUS ABA57061.1 718 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 TonB-dependent receptor protein.
ACCESSION CP000127-505
PROTEIN_ID ABA57061.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0541"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000531"
BEGIN
1 MLKRTPIFVL VATACAASPL LAQDEEVTLP ELEVVGQPVE RAGVEAENKP FATPDTADLL
61 RRVPGANVNA NGPIAGMVQY RGMFGPRMNV RINGTPIESG GPNWMDPPLS YAPRSLVESI
121 EVTRGVGSVS TGSGIGGYVE AKTKSSHFTG SEQFEFHSDV DIAGHSVDGG YNLGGILSLS
181 NDRHRLHFLG SRDDGGDTEF GDGTIKATEY ERNTYGAGYG FKTGDHEFSA DYQRLDTENS
241 GTPSLPMDIS FIRTNRAGGK YTGFWNDIQL ETRFGYSDVD HQMNNFRLRQ AANFCALPAP
301 FCQGDDKRLV NAGSEDFNYG LKATFALWGG DLAIGADGHA AQHNATVLDP DFAPFFVTNF
361 NNAQINKYGF FSEWTKEIYS NWELQLGARY DRVEMDADGV NAFPAQLADR GMGGMPAQMI
421 QMLRNRFNGA DRGQNNNNVD WVAELSYQMN SALRWTFGAA RKMRSPTYIQ RYLWIPLEVN
481 AGLGDGNAYV GNVALDPETS HELGFGFDWQ TQAAYFSPQA YYRRVDDYIQ GTPAADPVVI
541 AVSTNAAGDA TPLQFSNVDA EIYGLDADFG YRFHPRWRLD GVASYVRGKR RDINDNLYRI
601 APPNLRLSLT HERIHWFTTV ESVLVYRQEN ISDTNTLDPG NANNTNEATP GYVLVNLYGQ
661 YRLLNQGITF TAGINNLLDK TYTNHLTGFN RVLNSDVSQG RRLPGPGRNF YAALRYEF
//