LOCUS ABA57060.1 501 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 ABC transporter, fused
inner membrane component and substrate-binding domain
protein.
ACCESSION CP000127-504
PROTEIN_ID ABA57060.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0540"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000515"
/db_xref="InterPro:IPR007210"
BEGIN
1 MEGRTVNKAS LALALWLLFS GCLADSAVIV GSKKFTESIL LGELVVQQIR SAGVNAIHRR
61 ELGGSRVLWN ALLTGEIDIY PEYTGTLYYE IFSRQVTEEA ELRRLLVAQG IEMSRPLGFN
121 NTYALGMKEA VAERLNIRKI SDLVRHPELV LGFSNEFMAR ADGWPGLRTR YGLPQRQVSG
181 LDHDLAYRGL AQGSLQVIDL YSTDAEIDYY GLRVLEDDRH YFPDYKALLL YRRDLLKQAP
241 EAVTALHSLE GRLDSASMAA MNAQVKLERV PDFQVAGNFL EQTFGHRPQA SPVTAWQRFY
301 RHTKEHLVLV GISLTSAIVV AIPLGVIAAY RPRLGSIILS IAGIIQTIPA LALLVFMIPL
361 LGIGGPPAVV ALFLYSLLPI LRNTHTGLHD ISPQLRESAV ALGLSTGARL RLVELPMASR
421 AILAGIKTSA VINVGTATLG ALIGAGGYGQ PILTGIRLDD VSLILEGAIP AAGLAMLVQG
481 LFEWADRAIV PKGLRLAERK R
//