LOCUS ABA57043.1 604 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 sodium/proton antiporter,
CPA1 family protein.
ACCESSION CP000127-487
PROTEIN_ID ABA57043.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0521"
/inference="non-experimental evidence, no additional
details recorded"
/note="TC 2.A.36"
/transl_table=11
/db_xref="InterPro:IPR000169"
/db_xref="InterPro:IPR006153"
BEGIN
1 MESDLILIFS FIVVLGVSIQ WLAWRFQVPA IVLLLMAGFA LGPVLGWLDP EQTFGHILPP
61 LIALSVAIIL FEGGLNLQWH EYKEAGVDVR RLVSLGLFLT WTLNTAAAHF IAGLSWPIAT
121 LFGAISVVTG PTVLMPLLKF ARLQRRTAAL LKWEGIINDP LGALLAILVF QYWAVWYWVM
181 ESPEHGILAA LGNLGLGLLA ATSAGIGFGY LLSWAFHRGH VPEFLKSPVM LGAVLLLYVA
241 INAVQEEAGL LAVTVAGVVV ANQRLRNIEE LRRFKEHITL ILVSTLFIVL SANIELETLA
301 RLDWHSLALL GIAIFFVRPL SVYLATLGTG IKWRERLLIA WIAPRGIVAA SMAGLLAFPL
361 IQQGFKGADQ LLPLVFALIA ATVILHGLTM AGLGRLLGLA AHNPNGVLIV GATPWSVDLA
421 RSLKKLGIPV IVNDTSWHHL RAARLSNLEI YRGQILSEIA ETSLELNAIS YVLAVTANDA
481 YNALVCTRFA PQLGQNHVFQ LPSIANSSEK DKTFARSARG RIAFDENTQY EDFMRHYYHG
541 WEFRSTQLTE EYTYEDYLQD RPQELILIAV VTKNGQLTFY PLAGLNPPET GDTIISFSPD
601 DSES
//