LOCUS ABA57034.1 581 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 TPR repeat protein protein.
ACCESSION CP000127-478
PROTEIN_ID ABA57034.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0511"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001440"
/db_xref="InterPro:IPR011717"
BEGIN
1 MKQAPFRLTA GLVVLLLAGC ATQEMRPAVA AKAEENTTGP ATATAIPETR YPDVELTPAL
61 LYQLLSADIA GQRGQIGYAM EVYLQAAGET RDPRLAERAT RIALFARDIS AATQAARLWV
121 RADPSNGDAR QALVSLLLGQ QQYNEAENHL EHLVALSPES GERTFLKIAT MLAGSADPET
181 ALALMGNLSA FQANDPDALY GYAYLALQLK QLDLALSTVE RVIIQRPEAD RPLIMRARIL
241 QQQGREEMAL ESLETVIENE EASIPLRLAY GQMLMEAGQV AKAERLFEQL EQAQPENPDV
301 LLAQGLLAME RLEYKPAEDY FQRLLKLGQN VDQARFYLGR LAELQSNAGK AIDWYASITG
361 GRLMVDAQVR QAVVTAQQGN LPAARQHLQL LSRKFPTQAD RFQLAEGEIL INAGRYEEAM
421 SHYDNALHSR PDDTNLLYAR ALVAENLGRL DIAEQDLQRV ITLEPSNAEA LNALGYTLAD
481 RTRRLEEALR YISRAMRLKP NNAFILDSMG WVHYRLGNYD KAEKYLREAM ELRKDPEIAA
541 HLGEVLWAKG DREGARQVWQ HTLKMNQGNK VLLEVMQRFQ E
//