LOCUS ABA56646.1 480 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 dihydrolipoamide dehydrogenase
protein.
ACCESSION CP000127-90
PROTEIN_ID ABA56646.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0113"
/EC_number="1.8.1.4"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000103"
/db_xref="InterPro:IPR000205"
/db_xref="InterPro:IPR000815"
/db_xref="InterPro:IPR001100"
/db_xref="InterPro:IPR001327"
/db_xref="InterPro:IPR004099"
/db_xref="InterPro:IPR006076"
/db_xref="InterPro:IPR006258"
BEGIN
1 MSERYDVVII GAGPAGYTAA IRCAQLGLQT ACIDKWIAAD GRPALGGTCL NAGCISSKAL
61 LDSSELYQRA QKEFAEHGIK VEQAGVDVTA MQARKDRLVH RLTANIAALF EDRQIKWLPG
121 HGRLLEDNRV EFTPHGLDRP EILAAKSVVL ASGSQPMELG AAPIDGERVV DSTGALSFQE
181 VPQRLGIIGA GVIGVELGSV WTRLGAKVTL LEAQDTLLPM ADITISQEAY KQFKDQGLDI
241 RLGARVVSTR VSSKQVTVCY RIGEKEYELE VDKLVVAVGR QPCLDNLFAL EAGLLLDERG
301 FIHVDEYGTT NLPGVYAVGD VVRGPMLAHK GSQEGIAVAE TIAEGKKTAV KRNSIPWVIY
361 TEPEIAWAGR TEQALRDADI DVRVGTFYFA DSARANVMSG SKGLVKIIAD AMTDQILGVH
421 IIGPWASELI AEAVLAMEFA ASSEDLARTI HAYPSLAEAL HEAALDVDNR AIHKIGRKKE
//