LOCUS ABA56595.1 601 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 toprim domain-containing
protein protein.
ACCESSION CP000127-39
PROTEIN_ID ABA56595.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0053"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
BEGIN
1 MDKTFSDFGI DVPPAASGQL SLTCPQCSAQ RKKKRAKCLS VNVEKGAWIC HHCSWRGGLS
61 QREQSNRTLY WRRPDYRQPA PFSPGALPED IQRWFAKRGI TPAVLERNHI ATKKVYMPQL
121 ERWVSAIAFP YYRGETLINA KYRDGRKHFR LEAGAERILY GLNDLEQTTL IVEGEMDKLA
181 LEVAGFRNVV SVPDGAPPPQ AKDYARKFEF LQADEEALKT VKTWVIAVDN DAPGQYLAEE
241 LSRRFGREKC KRVLWPEACK DANEVLLKRG PEVLTDCIKN AQPYPLAGVL TVSHLSEDID
301 FLYTHGLKRG MSTGWPSVDI CYTVKPGELT VVTGVPNSGK SNWLDCLALN LAQQGWRFGV
361 FSPENQPVGH HMARMIEKWA GKPFNKGSIA RLSRSTLAQG KDWVHEHFYW ILPEDDQDWT
421 VEHVLDRARA LVLRYGIKGL LLDPWNEFEH LRAPNVTETE YISLVLKRVR QFARYYQVHV
481 WIVAHPAKLF RGKNDQYPVP TLYDISGSAN WRNKADNGLV IWRDLGDPKK DLVEIHIQKI
541 RFREVGRLGA VRLRFDPVTA VYREPEPDDE AAFPPADGAD KADEQAYLDS LYAEYEAQGG
601 K
//