LOCUS AAH51025.1 1439 aa PRT HUM 18-MAR-2009
DEFINITION Homo sapiens HMGXB3 protein protein.
ACCESSION BC051025-1
PROTEIN_ID AAH51025.1
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5272)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5272)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Qualifiers
source /db_xref="H-InvDB:HIT000099282"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4914524"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
protein /gene="HMGXB3"
/gene_synonym="SMF"
/db_xref="GeneID:22993"
/db_xref="HGNC:HGNC:28982"
BEGIN
1 SVVCRYCRCS RQTGASVTTV SLPSSSSSPG LDPRGPRQAS VRSLRSEPVL LFLPFRTPYR
61 DSEEGKREGL SRLRAVCRRA GPRGRGSFSP RDARASPRLH FLVAAVTTGA ASRRQRGARV
121 RQPSPSSSRR AKRLRECERR SLHAPPAMDA SYDGTEVTVV MEEIEEAYCY TSPGPPKKKK
181 KYKIHGEKTK KPRSAYLLYY YDIYLKVQQE LPHLPQSEIN KKISESWRLL SVAERSYYLE
241 KAKLEKEGLD PNSKLSALTA VVPDIPGFRK ILPRSDYIII PKSSLQEDRS CPQLELCVAQ
301 NQMSPKGPPL VSNTAPETVP SHAGMAEQCL AVEALAEEVG ALTQSGAVQE IATSEILSQD
361 VLLEDASLEV GESHQPYQTS LVIEETLVNG SPDLPTGSLA VPHPQVGESV SVVTVMRDSS
421 ESSSSAPATQ FIMLPLPAYS VVENPTSIKL TTTYTRRGHG TCTSPGCSFT YVTRHKPPKC
481 PTCGNFLGGK WIPKEKPAKV KVELASGVSS KGSVVKRNQQ PVTTEQNSSK ENASKLTLEN
541 SEAVSQLLNV APPREVGEES EWEEVIISDA HVLVKEAPGN CGTAVTKTPV VKSGVQPEVT
601 LGTTDNDSPG ADVPTPSEGT STSSPLPAPK KPTGVDLLTP GSRAPELKGR ARGKPSLLAA
661 ARPMRAILPA PVNVGRGSSM GLPRARQAFS LSDKTPSVRT CGLKPSTLKQ LGQPIQQPSG
721 PGEVKLPSGP SNRTSQVKVV EVKPDMFPPY KYSCTVTLDL GLATSRGRGK CKNPSCSYVY
781 TNRHKPRICP SCGVNLAKDR TEKTTKAIEV SSPLPDVLNA TEPLSTAQRE IQRQSTLQLL
841 RKVLQIPENE SELAEVFALI HELNSSRLIL SNVSEETVTI EQTSWSNYYE SPSTQCLLCS
901 SPLFKGGQNS LAGPQECWLL TASRLQTVTA QVKMCLNPHC LALHSFIDIY TGLFNVGNKL
961 LVSLDLLFAI RNQIKLGEDP RVSINVVLKS VQEQTEKTLT SEELSQLQEL LCNGYWAFEC
1021 LTVRDYNDMI CGICGVAPKV EMAQRSEENV LALKSVEFTW PEFLGSNEVN VEDFWATMET
1081 EVIEQVAFPA SIPITKFDAS VIAPFFPPLM RGAVVVNTEK DKNLDVQPVP GSGSALVRLL
1141 QEGTCKLDEI GSYSEEKLQH LLRQCGIPFG AEDSKDQLCF SLLALYESVQ NGARAIRPPR
1201 HFTGGKIYKV CPHQVVCGSK YLVRGESARD HVDLLASSRH WPPVYVVDMA TSVALCADLC
1261 YPELTNQMWG RNQGCFSSPT EPPVSVSCPE LLDQHYTVDM TETEHSIQHP VTKTATRRIV
1321 HAGLQPNPGD PSAGHHSLAL CPELAPYATI LASIVDSKPN GVRQRPIAFD NATHYYLYNR
1381 LMDFLTSREI VNRQIHDIVQ SCQPGEVVIR DTLYRLGVAQ IKTETEEEGE EEEVAAVAE
//