LOCUS       WKY07435.1               546 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-4260
PROTEIN_ID  WKY07435.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007129"
                     /note="NIPPO_CHRIV.G10969.T2"
     intron_pos      46:0 (1/12)
     intron_pos      81:1 (2/12)
     intron_pos      102:2 (3/12)
     intron_pos      135:2 (4/12)
     intron_pos      165:2 (5/12)
     intron_pos      199:2 (6/12)
     intron_pos      258:0 (7/12)
     intron_pos      316:0 (8/12)
     intron_pos      356:2 (9/12)
     intron_pos      393:0 (10/12)
     intron_pos      438:0 (11/12)
     intron_pos      488:0 (12/12)
BEGIN
        1 MATGSIFTLL LAVRLAVFVA TLSSHPKVLL ISFDGFRYDL LNRTMTPNIF RWTLNSTWFV
       61 NGLKSQYTTS TAPNHMSIVT GMREVDHGIV SNVFIDTKTG KWYDYFDLTG REGAVEASLD
      121 KSWYFGDPIW LTNERSDFTR RSAVLYWPAS DAAYPQPPHR PWLHRRFVPG RDLNDWTMDV
      181 DEIVHLFISD RSPVNFVAWY VDEPDHVLHN NGFYNGELNM VVDSLDKLFG YLIERFRQTG
      241 LQDAVDIILT SDHGHAQIER PENIMCVREF LPDDGYEIAD HMIYPRDEEV AQQIYKNLTA
      301 AVEKFGYKVN VYLKENLPSR YFFSNSTRVG RIVIDGEIGS AASLKKGCSS DLGHQKGAKT
      361 VIHASTHNSD PERQEMRGIL VVGGPSIIRG KKVSKIPENI DLYALMCKLL QIPPSPSSSS
      421 LSVVREALSG ALTGSHTRFL VIFLLIPSAF LAVVAISGRL RQTRFSLREW SQSGYRPIHT
      481 DIFDVEKELI VDELLYQDLN NSSTTNQRSG DSTNCKGERQ KALLTIRLLQ VDLQNFRKVD
      541 GKGTGY
//