LOCUS       WKY07086.1               891 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3911
PROTEIN_ID  WKY07086.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006912"
                     /note="NIPPO_CHRIV.G10752.T3"
     intron_pos      56:0 (1/20)
     intron_pos      106:2 (2/20)
     intron_pos      134:1 (3/20)
     intron_pos      176:0 (4/20)
     intron_pos      201:1 (5/20)
     intron_pos      246:1 (6/20)
     intron_pos      285:0 (7/20)
     intron_pos      310:1 (8/20)
     intron_pos      369:0 (9/20)
     intron_pos      417:1 (10/20)
     intron_pos      456:1 (11/20)
     intron_pos      494:0 (12/20)
     intron_pos      523:1 (13/20)
     intron_pos      561:1 (14/20)
     intron_pos      607:1 (15/20)
     intron_pos      651:2 (16/20)
     intron_pos      692:0 (17/20)
     intron_pos      748:0 (18/20)
     intron_pos      783:2 (19/20)
     intron_pos      837:2 (20/20)
BEGIN
        1 MATSYVTESL LGPASARGTS YTYTYESHYD NPPDVEDEED RYAAVDDGSI HQTHKITRVT
       61 KVTTTRSVRQ IPVGSPYADI YFDASGLPTP SPVVEVEAPL DELGIRLQKS GEEGRSAPPP
      121 APPLGSKYTH TNEGEQDVPS APSAPDVIGT AVGEVTLTWG APLQKPGERS ILGYQIELRE
      181 FPDGDWERAH DQLLRDTTCT ITNLENCSGE VQFRVSAAGP GGFGPPSMSS IPVRISQELS
      241 ERGTVGVPLP PGRPTVIAVD GHHATIEWTP PAVDPKSAPL SGYQVEYRVY GTVDWMVAND
      301 VLTPNCSYTI ENLRPNGVYE FRVRGRNADG MGAPSRSSGA THIKPAAPQR GAGSRPILPG
      361 LRPPGQPQLV EADIDWVKLE WASSEDGAGY IVEFREVGDP NWYTANQHPI TMNCIHVEGL
      421 RPGSTYEFRV ICVAGDAASL PSEVSDVISL RPLWKPSPNR GVPGRPQAPE YLEIAGERIT
      481 ICWLPAHSTL PVLGYDVEFR DFQQDAGWYK VNDHPVHACK MTVGDLIVGH EYQFRVLAHN
      541 VVGCSEPSEA SPPVTIKSGV GDAKYVEAER FGAVQLLMDE MVRESPPLPE RDDSPPPLHR
      601 GKGNGNLQWR DPSLKEVIDY LDNPDQEKQL NASGYLQHLT FSDNLIKDET REYGGIPKLI
      661 HLLKSDMPVI QKNACACLKN LCFGKENDRN KLAVLDGDGV RMLAAVLQSS NDTAVKEEAT
      721 AVLWNLSSAD MLKPVILDAV TDALVQQVTA LPTEYQPNGL SSDADPYRHY NTATFKNVTG
      781 VLRNVSAASA AARKRLRACP NLIEALVHFL TVAIQRNQVD SQPVENVVCL LRNLSYRIQE
      841 VEDPNYDPAT AHMAYSKGSK SAPNSPKPRK EKDKKKDQNR EPVVVSCFYD I
//