LOCUS       WKY06221.1               868 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-3046
PROTEIN_ID  WKY06221.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006431"
                     /note="NIPPO_CHRIV.G10271.T1"
     intron_pos      29:1 (1/20)
     intron_pos      82:0 (2/20)
     intron_pos      122:2 (3/20)
     intron_pos      146:2 (4/20)
     intron_pos      177:0 (5/20)
     intron_pos      211:1 (6/20)
     intron_pos      261:2 (7/20)
     intron_pos      327:1 (8/20)
     intron_pos      361:1 (9/20)
     intron_pos      410:0 (10/20)
     intron_pos      459:1 (11/20)
     intron_pos      497:0 (12/20)
     intron_pos      548:0 (13/20)
     intron_pos      602:1 (14/20)
     intron_pos      622:1 (15/20)
     intron_pos      671:1 (16/20)
     intron_pos      705:0 (17/20)
     intron_pos      731:0 (18/20)
     intron_pos      793:0 (19/20)
     intron_pos      833:1 (20/20)
BEGIN
        1 MKPKRRSTFS PARADTTLKS PRAKRKRLDS SSPSRRKSSN SSDEVKPPPE FIPFRYEKLC
       61 PKLQELLGIN SDEISLDKDD LLTLQHELEK MLAHSADYMR RAHGEVTYLN TGDYPVQDLR
      121 TRPMPVFKVR EFVPVSPTAT KELHETLCGL PEDDKDDNLD IWPPHHIPQR FWTWCKEDFL
      181 TPIDAEYLKN FKAQLLDKYD PKGLKDYFVN EPWKHRKRHS NRLRLCSSDL QGSRSARRSS
      241 VDVNSLEKRN KEKDERSQAN SNSSVRKASG SLSTRQTRAQ DSKLAPLISD VVFAASREMR
      301 KDDMSTPVRR SSIRLHSLDD CEDERKTSIK SELTDVGSHD SSCSEFHGNG FTSRSPLSSR
      361 MHSPRIKRET RDEEDEWDRP GPSTACPSSS VSNGRCNGEL KTRPRRNGEI KRENGIHSVP
      421 CDLSSPSLSA ASSGNEEGEV ERHYREIGSR IVKMLVQRGL IPSSTEHVYR EIATGSISRD
      481 DLISREGKDD DDDSDLDEVS EELLRCQMEL QELEPRLRGV ISHCWSKVRA EFAYWETSKQ
      541 LDDADTDLFR LGVNMYRELP TRRLPISSEL PTLRTALCRR NRKARQHYGS LYKRLPKYRK
      601 RSAMDYRVRI ALAFALSCVV RGLNSSDVSS LNEVQRKEVP IALTDVLKTS TVTVGSLPTT
      661 APNAGVADSL SNGAASVRHP FSADVMEAKS SESKKSSANR TTSVKVTAPS VAAPEFEDRN
      721 EQDEGGKGEE DPDANVDEGA NAAPPADDVA VGEGVAKEDT EPVKGKDKEE NQLGAMVEDA
      781 KGNVPVPQAP SKPQTRVDLE EPEDSHFMTF AVVGMLLVFC LYLLHHNKKK ILGLVFEGRA
      841 TGPSRRNVRY RRLSQRDDHE AFKEDVIY
//