LOCUS       WKY05856.1               551 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-2682
PROTEIN_ID  WKY05856.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_006234"
                     /note="NIPPO_CHRIV.G10074.T2"
     intron_pos      12:2 (1/14)
     intron_pos      42:1 (2/14)
     intron_pos      84:0 (3/14)
     intron_pos      116:2 (4/14)
     intron_pos      138:0 (5/14)
     intron_pos      169:1 (6/14)
     intron_pos      227:1 (7/14)
     intron_pos      248:1 (8/14)
     intron_pos      283:0 (9/14)
     intron_pos      347:1 (10/14)
     intron_pos      383:0 (11/14)
     intron_pos      418:0 (12/14)
     intron_pos      467:2 (13/14)
     intron_pos      497:2 (14/14)
BEGIN
        1 MSSYDVIGSD DDEPLITSPR SVSSTLSPAN LSRVRQPYMF TGGLGLSREG SLVSLHSEDD
       61 FREHNMALRY RLYSRLDPGG QQLRMPDHVI PSEYFSILPF EDMKDRSGKQ SSIVTIFSLW
      121 NTMMGTSLLA MPWALQQAGL FWGLFLMLSL ALICYYTAYL VLDSPRNIPG IMDPVMMEFS
      181 DVCRHFFGRV GEYLAVGFSV VVLLGGIMVY WVLMSNFLYY TGAVVYESLQ PNSSTIPIME
      241 NKTFTCDVYC PLEQSAPLMG NKELLDYLAE PTWDFDRLWQ LQGTVPLYLA ILTFPLMNFK
      301 SPTFFTKFNV LGTLSVMYLL VFTGSKLLEC GLNMDFSDKD SIHYAAPFNW HFPALTGTMT
      361 LSYFIHNAVL TILRNQKNPE NNARDLSIGY ALAAISYVFI GFTFYAGFPV QRSCISDNFL
      421 NNFGAGDILS STARLFLLFQ MITVLPLLMF LIRSQLFYAF LGKTWPGIGS VILLNCGIIA
      481 IAVSVAILYP KVGSILRYVG SLSGLIYVFA LPCIVYMKKL HTEGRLTTSK RIIHTTIVAL
      541 GVLNFIAQFF L
//