LOCUS       WKY03501.1               802 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-325
PROTEIN_ID  WKY03501.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004901"
                     /note="NIPPO_CHRIV.G8741.T1"
     intron_pos      2:0 (1/20)
     intron_pos      31:0 (2/20)
     intron_pos      100:0 (3/20)
     intron_pos      141:0 (4/20)
     intron_pos      184:1 (5/20)
     intron_pos      231:1 (6/20)
     intron_pos      261:0 (7/20)
     intron_pos      297:0 (8/20)
     intron_pos      349:0 (9/20)
     intron_pos      407:2 (10/20)
     intron_pos      454:2 (11/20)
     intron_pos      480:1 (12/20)
     intron_pos      546:0 (13/20)
     intron_pos      591:0 (14/20)
     intron_pos      613:1 (15/20)
     intron_pos      656:1 (16/20)
     intron_pos      695:0 (17/20)
     intron_pos      729:2 (18/20)
     intron_pos      751:0 (19/20)
     intron_pos      784:0 (20/20)
BEGIN
        1 MGIDINHKHD RKVRRTAPKS EDPYLRILAK LYTFLARRTG EKFNNIMMRR LFMSRRFRAP
       61 LSIARISRIL SKKGNAGKLV VTCGTVTDDA RLYVVPKFTL AALKVTEGAR ARILKAGGEV
      121 ITLDQLALRA PKGENTLLIQ GPRKAREAQK HFGPAPGVPH SHTKPYVRSK GRKFERARGR
      181 RASRMGISRY ISRRYVAVLR YLVVVGCFYI IYQAAFAPSG DQSYGVGRAG RFENIAPEAN
      241 QKPREDGVDP FERFRNAPMK NWEDLDAYRK DQQRVGPGEQ GKPVQAPKGP GVEQEALALY
      301 KANGYNAYIS DLISLNRSVK DLRHHQCRSV SYRSQLPSVS VIFPFHEEHN STLLRSVYSI
      361 INRSPKELLK QIILVDDFSE KPFLKKPLED FLKRNKLDNL VMVLRTKKRE GLIRARQLGA
      421 EKATGDVLIF LDAHSEANYN WLPPLLDPIV QDYRTVVCPF VDIIDCDTYE LRPQDEGARG
      481 SFDWSFNYKR LPLTRKDLEN PTKPFPSPVM AGGYFAISAK WFWELGGYDD GLDIWGGEQY
      541 ELSFKVWQCH GRMVDAPCSR VGHIYRCKYM PFKSAGVGDF ISRNYRRVAE VWMDEYKHHL
      601 YKHRQGVGTA DTGDLSRQKA VRVRLNCKSF DWFMKEVAFD QDKYYPAVEP KPSASGELRN
      661 KGADMCVNTN FKSANQRFGL SKCSSDDPNV AGEQNMRLTR WHDIRPGGRN VCFDASTSIE
      721 KAPIVLFDCH SMKGNQLFKY RFETNQLYHP VSNQCLSAEK DGSGFLFMNP CDDTDDTQKW
      781 IWQVMDEKLL KERQESEKTE RD
//