LOCUS VTS03728.1 1287 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana hybrid histidine kinase : Candidate histidine kinase, hybrid OS=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) GN=Rta_10540 PE=4 SV=1: CHASE3: PAS_4: PAS_3: GAF: PAS_4: PAS_4: HisKA: HATPase_c: Response_reg protein. ACCESSION LR593886-8506 PROTEIN_ID VTS03728.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_70860" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|F5Y0B7|F5Y0B7_RAMTT ; ALN/Q_length_ratio=0.403 ; DESCRIPTION=Candidate histidine kinase, hybrid OS=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) GN=Rta_10540 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=2.336" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|F5Y6H4|F5Y6H4_RAMTT ; ALN/Q_length_ratio=0.483 ; DESCRIPTION=Candidate histidine kinase, hybrid OS=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) GN=Rta_29450 PE=4 SV=1 ; EVALUE=1e-163 ; Q/S_length_ratio=1.671" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A0A085EYK4|A0A085EYK4_9BURK ; ALN/Q_length_ratio=0.617 ; DESCRIPTION=PAS domain S-box protein OS=Massilia sp. LC238 GN=FG94_04052 PE=4 SV=1 ; EVALUE=1e-135 ; Q/S_length_ratio=1.573" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A0A068Z2Z8|A0A068Z2Z8_9BURK ; ALN/Q_length_ratio=0.414 ; DESCRIPTION=Signal transduction histidine kinase OS=Polaromonas sp. CG9_12 PE=4 SV=1 ; EVALUE=1e-134 ; Q/S_length_ratio=1.591" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A4BUY9|A4BUY9_9GAMM ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=Multi-sensor hybrid histidine kinase OS=Nitrococcus mobilis Nb-231 GN=NB231_07115 PE=4 SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.549" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A3ZU84|A3ZU84_9PLAN ; ALN/Q_length_ratio=0.495 ; DESCRIPTION=PAS protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_21639 PE=4 SV=1 ; EVALUE=1e-124 ; Q/S_length_ratio=0.983" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|A0A017SZ65|A0A017SZ65_9DELT ; ALN/Q_length_ratio=0.302 ; DESCRIPTION=Chemotaxis protein methyltransferase CheR OS=Chondromyces apiculatus DSM 436 GN=CAP_7340 PE=4 SV=1 ; EVALUE=1e-122 ; Q/S_length_ratio=2.096" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|F5XZ70|F5XZ70_RAMTT ; ALN/Q_length_ratio=0.497 ; DESCRIPTION=Candidate histidine kinase, hybrid OS=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) GN=Rta_21440 PE=4 SV=1 ; EVALUE=1e-122 ; Q/S_length_ratio=1.671" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|B2TDE8|B2TDE8_BURPP ; ALN/Q_length_ratio=0.444 ; DESCRIPTION=PAS/PAC sensor hybrid histidine kinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=Bphyt_5296 PE=4 SV=1 ; EVALUE=1e-121 ; Q/S_length_ratio=1.659" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|Q13MN8|Q13MN8_BURXL ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=PAS/PAC sensor hybrid histidine kinase OS=Burkholderia xenovorans (strain LB400) GN=Bxe_B1311 PE=4 SV=1 ; EVALUE=1e-120 ; Q/S_length_ratio=1.659" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|W0VAE6|W0VAE6_9BURK ; ALN/Q_length_ratio=0.400 ; DESCRIPTION=Sensory box protein OS=Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 GN=GJA_4246 PE=4 SV=1 ; EVALUE=1e-120 ; Q/S_length_ratio=1.435" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|A0A089C3P1|A0A089C3P1_9BURK ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=Sensory box protein OS=Burkholderia xenovorans GN=DR64_6618 PE=4 SV=1 ; EVALUE=1e-120 ; Q/S_length_ratio=1.659" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|A0A086W666|A0A086W666_9BURK ; ALN/Q_length_ratio=0.414 ; DESCRIPTION=Diguanylate cyclase OS=Massilia consociata GN=JN27_22675 PE=4 SV=1 ; EVALUE=1e-119 ; Q/S_length_ratio=1.661" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|D5C3W3|D5C3W3_NITHN ; ALN/Q_length_ratio=0.451 ; DESCRIPTION=PAS sensor protein OS=Nitrosococcus halophilus (strain Nc4) GN=Nhal_1977 PE=4 SV=1 ; EVALUE=1e-118 ; Q/S_length_ratio=1.633" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|F0SKC0|F0SKC0_PLABD ; ALN/Q_length_ratio=0.464 ; DESCRIPTION=Multi-sensor hybrid histidine kinase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_3280 PE=4 SV=1 ; EVALUE=1e-117 ; Q/S_length_ratio=0.897" /note="Pfam_scan:hit_1 (37..174); Pfam:PF05227.8:CHASE3; Pfam_type:Domain;HMM_aln_Length:134; HMM_Length:138; EVALUE:1.3e-27; BITSCORE: 96.2" /note="Pfam_scan:hit_2 (229..344); Pfam:PF08448.5:PAS_4; Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:110; EVALUE:9.9e-13; BITSCORE: 48.1" /note="Pfam_scan:hit_3 (376..461); Pfam:PF08447.6:PAS_3; Pfam_type:Domain;HMM_aln_Length:89; HMM_Length:91; EVALUE:1.1e-08; BITSCORE: 35.0" /note="Pfam_scan:hit_4 (497..635); Pfam:PF01590.21:GAF; Pfam_type:Domain;HMM_aln_Length:148; HMM_Length:154; EVALUE:5.2e-13; BITSCORE: 49.4" /note="Pfam_scan:hit_5 (662..776); Pfam:PF08448.5:PAS_4; Pfam_type:Domain;HMM_aln_Length:102; HMM_Length:110; EVALUE:2.3e-06; BITSCORE: 27.6" /note="Pfam_scan:hit_6 (799..909); Pfam:PF08448.5:PAS_4; Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:110; EVALUE:8.3e-14; BITSCORE: 51.5" /note="Pfam_scan:hit_7 (920..986); Pfam:PF00512.20:HisKA; Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:68; EVALUE:6.8e-11; BITSCORE: 42.0" /note="Pfam_scan:hit_8 (1032..1144); Pfam:PF02518.21:HATPase_c; Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111; EVALUE:5.2e-28; BITSCORE: 96.9" /note="Pfam_scan:hit_9 (1168..1280); Pfam:PF00072.19:Response_reg; Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:112; EVALUE:1.9e-22; BITSCORE: 79.3" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0016301" /note="GO_domain:GO:0004871" /note="Enzyme_Code:EC:2.7.3" /note="Enzyme_Code:EC:2.7.13.3" BEGIN 1 MAKELDRGVL TGIWLLAALV VINAGVSYWN TRKVHDDARQ VAHTQEVLTA LGAVRASACD 61 IEAAQRTFIL TGADRDRAAF QNAEGQTRAK LTRLTELTAD NPDQQARIAA LGAHVDRAVD 121 RLSATVAVRD ARGLEAAREI VAQGESRQLL DDADRTANEI ETAEQTLLRE RAIETERAYL 181 HARLFGAASA VFGLTAVGMF VWLLRHGTRA REAAAAKVWE QREWLRTTLA SIGDAVIATD 241 PAGNITFLNS VAETLTDWHN GTAVGRPLTE VFRIVNESTR VPVENPALRA LKSGTIVGLA 301 NHTILIAKDG TEYPIDDSAA PIRTPDGRVV GAVLVFRDIT ERKREEGERE RLAETLRLAV 361 AAADLGTWDW EPKTDRVTLS ERTIEIIGAA PGPNHTREWM RRVIHPDHRD RARNEAARAV 421 STRADYDIEY PLERDASVWI SARGRGVYDE SGELVRMLGV VQDITTQKNT ESALRESANQ 481 QQFLAELATT TQSIPGASEV MAATARLLAE YLNADRCAYA EVADESVFVV TGDYTRGVPS 541 MVGRWPVAAF GSECVRQMLA NEAYVVHDTH TDPRIGIADL PAYEAAAIRS VICVPLHKVG 601 QFTAAMAVHQ KTPRRWTPAE IQLVTTVVGR CWEALERARA AEAEQRLHAE ILAERGQLAE 661 VFQHSLSFMA VLRGPALVFE RVNDRFSELV GNRDVIGQAV REAVPEVEGQ GFFEILDRTY 721 RTGETYVATD ARVMLRTKDG ELEERILEFV YQAMRDATGA ISGILVQGID LTDHKRAEAE 781 LARVTAASER RRRLYETALS NTPDLIYVFD LEHRFTYANE ALLAMWGKTW DEAIGLTCSQ 841 LGYEPWHAAM HDQEIEQVAT TKRPIRGEVP FTGTNGRRIY DYIFAPVFGA QGEIEAVAGT 901 TRDVTDRQAM EQELREADKR KDEFIALLAH ELRNPLAPIR NGLQVLRLAG NDATALERTR 961 VMMDRQLSHM VRLVDDLLDA SRIGRNKLEL RLARVSLSEV LASAIETARP LIDSTGHTLN 1021 VSLPTELVPL DADLTRLAQV FSNLLTNSAK YTPRGGQITV SAECNGGEVV VAVRDTGIGI 1081 PARSLPSVFD MFSQVDRSIE RSTGGLGIGL ALVKGLVEMH GGTVTAASEG PGKGSTFAVR 1141 LPVPADQSEP LPEPHANAPV PVKHRRRVLV VDDNRDGAES MAEMLGLLGD EVQTAHDGLE 1201 AVTAAEEFRP ELILMDMGMP KLNGLDATRR IRSHSWGREM IIIALTGWGQ ENDRERSREA 1261 GCDGHLVKPM NFSELDKLLN TLGAKQK //