LOCUS VTS03087.1 469 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana ribosomal protein s12 methylthiotransferase : Ribosomal protein S12 methylthiotransferase RimO OS= Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rimO PE=3 SV=1: UPF0004: Radical_SAM protein. ACCESSION LR593886-8292 PROTEIN_ID VTS03087.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_73000" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|D5SRP7|D5SRP7_PLAL2 ; ALN/Q_length_ratio=0.945 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.013" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|F0SM65|F0SM65_PLABD ; ALN/Q_length_ratio=0.977 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.989" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|E8R3H0|E8R3H0_ISOPI ; ALN/Q_length_ratio=0.964 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.959" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|A4A2C7|A4A2C7_9PLAN ; ALN/Q_length_ratio=0.908 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Blastopirellula marina DSM 3645 GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.098" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|D2QWN1|D2QWN1_PIRSD ; ALN/Q_length_ratio=0.964 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.009" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|H5SCT3|H5SCT3_9BACT ; ALN/Q_length_ratio=1.058 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=uncultured planctomycete GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.929" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DKX8|L0DKX8_SINAD ; ALN/Q_length_ratio=0.947 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rimO PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.983" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M5RST1|M5RST1_9PLAN ; ALN/Q_length_ratio=0.991 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula maiorica SM1 GN=rimO PE=3 SV=1 ; EVALUE=1e-177 ; Q/S_length_ratio=0.992" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L7CDP7|L7CDP7_RHOBT ; ALN/Q_length_ratio=0.985 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula baltica SWK14 GN=rimO PE=3 SV=1 ; EVALUE=1e-169 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|K5DAM6|K5DAM6_RHOBT ; ALN/Q_length_ratio=0.985 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula baltica SH28 GN=rimO PE=3 SV=1 ; EVALUE=1e-168 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|F2AV24|F2AV24_RHOBT ; ALN/Q_length_ratio=0.985 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula baltica WH47 GN=rimO PE=3 SV=1 ; EVALUE=1e-168 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_12 ; ACCESSION=Q7UK39 ; ALN/Q_length_ratio=0.985 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula baltica (strain SH1) GN=rimO PE=3 SV=1 ; EVALUE=1e-167 ; Q/S_length_ratio=0.983" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5S7U7|M5S7U7_9PLAN ; ALN/Q_length_ratio=0.964 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula europaea SH398 GN=rimO PE=3 SV=1 ; EVALUE=1e-167 ; Q/S_length_ratio=1.029" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M5SXW9|M5SXW9_9PLAN ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula sp. SWK7 GN=rimO PE=3 SV=1 ; EVALUE=1e-166 ; Q/S_length_ratio=0.953" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M2ANM3|M2ANM3_9PLAN ; ALN/Q_length_ratio=0.964 ; DESCRIPTION=Ribosomal protein S12 methylthiotransferase RimO OS=Rhodopirellula europaea 6C GN=rimO PE=3 SV=1 ; EVALUE=1e-166 ; Q/S_length_ratio=0.985" /note="Pfam_scan:hit_1 (25..124); Pfam:PF00919.15:UPF0004; Pfam_type:Family;HMM_aln_Length:96; HMM_Length:98; EVALUE:7e-27; BITSCORE: 93.1" /note="Pfam_scan:hit_2 (173..345); Pfam:PF04055.16:Radical_SAM; Pfam_type:Domain;HMM_aln_Length:164; HMM_Length:166; EVALUE:4.3e-26; BITSCORE: 92.0" /note="GO_domain:GO:0005737" /note="GO_domain:GO:0006464" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0003674" BEGIN 1 MSVKSLPLTS SPGTGAPRAP ESKGNYAFIS LGCPKNTVDS ERMLGKLAQD GYALQPGADG 61 ADVVIVNTCG FIEPARQESL AVIREMLDLK RAGKVGAVVV AGCMAERQRD VLLEQVPEVD 121 QIVGVFGREE IADVVDRAVS QRDEQKSLFR PAPVRALEDT ARLRITPRHF AYLKISEGCD 181 RLCTYCAIPK MRGKHVTKPI EEIIREAHEL AADGVRELII VAQDTTYYGM DLYGCTRLAE 241 LLRELDKVDG IEWVRTLYAY PEHISDELIE TFAGAKKIIP YLDMPLQHIN DRVLKRMIRR 301 VDRAATEKLL LRLREQWPDL AIRTTFITGF PGETDAEYEE LKQFVADFKF ERVGVFPYSL 361 EPGTPAEKLD GHIPEDVKQT RVAAIMEVQQ RVAFGWAEAQ VDKEHPVIID GPDPEFANHF 421 RGRTYADAPE IDCEVRVKGK NLKPGDFVRV KITAADGYDL TAKALGKPW //