LOCUS VTS02712.1 833 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: DUF3738 protein. ACCESSION LR593886-8167 PROTEIN_ID VTS02712.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_74250" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.333 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=2e-50 ; Q/S_length_ratio=1.965" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.367 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=3e-46 ; Q/S_length_ratio=1.357" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.336 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=1.663" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.315 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=2e-41 ; Q/S_length_ratio=1.889" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.312 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=1.375" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.316 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-40 ; Q/S_length_ratio=0.756" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.418 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=8e-40 ; Q/S_length_ratio=1.504" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.252 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.728" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.353 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=5e-38 ; Q/S_length_ratio=1.151" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.248 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=9e-38 ; Q/S_length_ratio=0.679" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.346 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.933" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.261 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=2.611" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.307 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=7e-37 ; Q/S_length_ratio=1.456" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.323 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.488" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.309 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.395" /note="Pfam_scan:hit_1 (45..113); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71; EVALUE:2.2e-10; BITSCORE: 39.9" /note="Pfam_scan:hit_2 (142..195); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54; EVALUE:1.7e-08; BITSCORE: 33.8" /note="Pfam_scan:hit_3 (394..587); Pfam:PF12543.3:DUF3738; Pfam_type:Family;HMM_aln_Length:170; HMM_Length:189; EVALUE:3.1e-06; BITSCORE: 26.8" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MANQRLAATI DLLARSGIRG LSAVPDEQLV QHFARVRDES AFAELVRRHG SMVLGVCRRI 61 LTAGPDAEDA FQATFLFLAL RVGEIRNTAS VASWLHGVAR RVALNARKSR SRRTKHEQFA 121 ASDRPTEFTT EPATAASLTE LQGALDEELA RVPEPFRGAF VLCCLEGRTR PEAAVELSCT 181 EGTVSSRLAR ARQMLQDRLT RRGIAPAVAL TAGALFEIAV PPTLSASTAR IAGLLTTAGQ 241 GADTIPPAVA ALIEGVTTMT VKKTTVLAGL VVVAALAAGG IGLSAGSFQN RGPGAPPERP 301 TLSKGESPGD NQKKATSPSE YALKEGAVLK LVRAPFPEER DRLYMKFEAA KAFQPPPPSE 361 TRLMAVYTNG GTPVSANAFT DRSSPGTTEN GKPLAAFLEY PLNVDMANVL DRDHLLESVI 421 LDADVVLQKN AALDKLIPAL RDELKTKCGI DLRLEFAEVE TEVVRITGKH TLVSPAANPS 481 RLHDDAAVVH FYAKAREEHS NGIHTDTKQL PSQLAQFLGL PVIDESNLKS AAVWVTIRHH 541 LRYPITAKTR AEDADPVQVL KNVADQTGLT LKLEKQKVRV LVVEKQKKPA DPPKKLGRVP 601 DPEPNLQAEL ARWDTAFRHG SDEKFAELER TAGEWLKKYP GQDDRGHIYF QVAHVAAQSR 661 IDTQIARVRE YGQKVLEQSR DPVARGTVYS YLASAAEVDR TLKTFEERRR LAADVLLTGF 721 AEALAQELPA EAPELPAVNR IGGELENDPV EAARIRTQQA VQMEARREAK FVRDLVQRRN 781 TLVLQLRGLY RPTPNVHGRN EEGPKELRKL AAAKLSASAT EALLAEVMKP PAR //