LOCUS VTS02637.1 588 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2787 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: SBP_bac_10 protein. ACCESSION LR593886-8142 PROTEIN_ID VTS02637.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_74500" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DDY6|L0DDY6_SINAD ; ALN/Q_length_ratio=0.895 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2787 PE=4 SV=1 ; EVALUE=3e-72 ; Q/S_length_ratio=1.077" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.587 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A0A090KHM8|A0A090KHM8_9BACT ; ALN/Q_length_ratio=0.364 ; DESCRIPTION=Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=2.288" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DP71|L0DP71_SINAD ; ALN/Q_length_ratio=0.344 ; DESCRIPTION=Antirepressor regulating drug resistance protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6540 PE=4 SV=1 ; EVALUE=2e-39 ; Q/S_length_ratio=0.632" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.459 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=7e-38 ; Q/S_length_ratio=1.387" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.473 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.617" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.408 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=9e-37 ; Q/S_length_ratio=1.181" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.434 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=0.955" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.480 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=1.843" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.454 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=8e-36 ; Q/S_length_ratio=1.028" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.602 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.050" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.440 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=0.958" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|E8R1A0|E8R1A0_ISOPI ; ALN/Q_length_ratio=0.338 ; DESCRIPTION=Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0715 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=0.691" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.498 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=6e-34 ; Q/S_length_ratio=1.321" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0D782|L0D782_SINAD ; ALN/Q_length_ratio=0.335 ; DESCRIPTION=Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0690 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=0.704" /note="Pfam_scan:hit_1 (43..111); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:71; EVALUE:7.5e-12; BITSCORE: 44.6" /note="Pfam_scan:hit_2 (137..187); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:46; HMM_Length:54; EVALUE:7.2e-12; BITSCORE: 44.5" /note="Pfam_scan:hit_3 (306..388); Pfam:PF07596.6:SBP_bac_10; Pfam_type:Family;HMM_aln_Length:78; HMM_Length:265; EVALUE:1.2e-15; BITSCORE: 58.2" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSGSAINNYL RAVGIDPAAA GPSDAELVAR FSATRDESAF ELLVWRHAPL LQRVCRSVLR 61 DQHAAEDATQ ATFLALARKA GTFSGRGTVV GWLYRVARRV SVRLAKQRAR HPLASTELDR 121 VPAPDGLPAP TDGAGPLCEE VDRLPERYRV PVLLCFFEGL THTEAARRTG LPVGTIAGRL 181 SRAKALLARR LSRRGGVLAA VALPVVSGTF VGSTAQAAIL FATDRAIAPL VSGSVLSLAR 241 GATQPVISSL KLTAAAVAVA CTVSASVWAF NASAPVSIPN EDTPRAAAPT ATEPPAPKSD 301 ARVAGAVQRA KSANTLKQIL IAIHNYEAAY GALPQDIVDK NGKPLLSWRV AILPFVEHER 361 LYKEFNLDEP WDSAANKKLL AQMPNLFRVD GQAKGEIRTY YRVFSGPGAA FEPGEKIAFA 421 GVTDGLSNTI GVIEAGPPSE WTKPGDIAYD PKKPFPKLEG PFKNVVMAGM MDGSVVPFKP 481 DLDAAEFRKF VERADGQVVN IDKAKTNITA LTKEDLNALE KVLKEDVELG TRFSKLLAER 541 TKLLEQIAKR PAPELDLEKF SDEQTALRAH IVRLEEQIEI LKKALENK //