LOCUS VTS01648.1 293 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 region 2 : RNA polymerase sigma factor OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0594 PE=3 SV=1: Sigma70_r2 protein. ACCESSION LR593886-7813 PROTEIN_ID VTS01648.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_77790" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|F0SF66|F0SF66_PLABD ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA polymerase sigma factor OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0594 PE=3 SV=1 ; EVALUE=1e-149 ; Q/S_length_ratio=1.000" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|A6C2N1|A6C2N1_9PLAN ; ALN/Q_length_ratio=1.003 ; DESCRIPTION=RNA polymerase sigma factor OS=Planctomyces maris DSM 8797 GN=PM8797T_09229 PE=3 SV=1 ; EVALUE=1e-147 ; Q/S_length_ratio=0.980" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|D2R2Z3|D2R2Z3_PIRSD ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=RNA polymerase sigma factor OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_4074 PE=3 SV=1 ; EVALUE=1e-146 ; Q/S_length_ratio=1.000" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A3ZQ94|A3ZQ94_9PLAN ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA polymerase sigma factor OS=Blastopirellula marina DSM 3645 GN=DSM3645_23286 PE=3 SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=0.997" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|D5SXY2|D5SXY2_PLAL2 ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA polymerase sigma factor OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_3964 PE=3 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.000" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|K8IWN3|K8IWN3_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans serovar Pyrogenes str. 2006006960 GN=LEP1GSC019_0048 PE=4 SV=1 ; EVALUE=2e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|K6DAT0|K6DAT0_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. 2002000624 GN=LEP1GSC027_2061 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|N1ULU2|N1ULU2_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans serovar Australis str. 200703203 GN=LEP1GSC115_0223 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M6FAK7|M6FAK7_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. Kito GN=LEP1GSC075_0679 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|K6TGF8|K6TGF8_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. 2002000621 GN=LEP1GSC025_0286 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M6QCX1|M6QCX1_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans serovar Medanensis str. UT053 GN=LEP1GSC110_1284 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|M6BI92|M6BI92_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. 2002000631 GN=LEP1GSC032_2537 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M6AJU7|M6AJU7_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. 2003000735 GN=LEP1GSC034_2771 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|K6TM10|K6TM10_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. 2002000623 GN=LEP1GSC026_1244 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|M6AVH2|M6AVH2_LEPIR ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sigma-70 region 2 OS=Leptospira interrogans str. 2002000632 GN=LEP1GSC033_2598 PE=4 SV=1 ; EVALUE=4e-89 ; Q/S_length_ratio=0.990" /note="Pfam_scan:hit_1 (32..99); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:71; EVALUE:1.2e-14; BITSCORE: 53.6" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MFNPFAEVVD ESDDLALIES ARGGGLDSLE KLILRHQAWV YNIAVRMVFH PQDAEEVTQE 61 VLIKAVTHLS TFRGGSTFRT WLYRIAANHV MNMKRRGAEL QPHTFAEYGA AVEGVPDMDL 121 PDPNTVPVDV PLLVEEAKLT CTTGMLLCLD RRQRLVFTLG EVLGVSDTVG GEVLEMLADN 181 FRQSLARARR DLYQFMHDRC GLVNADNPCR CPKKTKGFIS AGHVDPDRLL FASRHALQVR 241 TAAHDTVREI ENTLDRQYAD VFRDHPFHQS PDQVAWLRRL LDQPAVRTTL RLS //