LOCUS VTS01275.1 537 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-7688 PROTEIN_ID VTS01275.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_79040" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.507 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-51 ; Q/S_length_ratio=0.875" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.518 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=6e-48 ; Q/S_length_ratio=1.267" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.469 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=4e-47 ; Q/S_length_ratio=1.078" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.572 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=1e-45 ; Q/S_length_ratio=0.899" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.536 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=2e-45 ; Q/S_length_ratio=0.959" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.505 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=4e-44 ; Q/S_length_ratio=1.207" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0D7N8|L0D7N8_SINAD ; ALN/Q_length_ratio=0.583 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0215 PE=4 SV=1 ; EVALUE=2e-43 ; Q/S_length_ratio=1.027" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.488 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=2e-43 ; Q/S_length_ratio=0.939" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.495 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=5e-43 ; Q/S_length_ratio=1.070" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.449 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=6e-43 ; Q/S_length_ratio=1.114" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0D9N2|L0D9N2_SINAD ; ALN/Q_length_ratio=0.507 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1558 PE=4 SV=1 ; EVALUE=9e-43 ; Q/S_length_ratio=0.598" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.393 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=1e-41 ; Q/S_length_ratio=1.683" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.453 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=7e-41 ; Q/S_length_ratio=0.487" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.482 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=2e-40 ; Q/S_length_ratio=1.218" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.499 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=4e-39 ; Q/S_length_ratio=0.886" /note="Pfam_scan:hit_1 (47..119); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71; EVALUE:3.1e-10; BITSCORE: 39.4" /note="Pfam_scan:hit_2 (139..192); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:1e-13; BITSCORE: 50.4" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MVTIRTHRTA SALARMQTDA LSENRHTDEE LIGAFVELRA SDAFEELVRR HGPMVLGVCL 61 RVLRHRQDAE DAFQATFLVL ARKAGSISPR NAAANWLHGV ALQTAIRARA ITMKRRKRET 121 SVPLVPEAGV REVWWDDVAA VLDEELEHLP GHYRAVVLLC DVEGRTRADT ARHLGCPEGS 181 VSSRLSRARA LLARRLSRRG VAPPLGGLAL LAGPSAAVAV PPALVKSTVE AARSLVAGPV 241 PGASTSSAVT TLTEGVLKAM LITELKALAL IAVFVGFLGL GGAIGLGRSA GQQPGKPVEE 301 KRVDCPKNPE EHLQKEVDAA VENVKRAKKA LDAAVKELHE ADERLATAKR KGKPIEVKPV 361 TGKLLRSDVA ERTVHVEVYK EVTDPRAVLW GGIIGFCGDV YEIFPLVPQA TVLQDHVPTK 421 LVDLKNGAQV TLRLGRDGKS AESVTVDGGS VRGRFVSWNE TRNTITVTVG AKNEPRVFHL 481 LRETCVRGAA HVKDFKPGTP LLITRSVEDA NTVIEIEAVA ADEGRTDPQP NRPAKRE //