LOCUS VTR99129.1 540 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-6971 PROTEIN_ID VTR99129.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_00440" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.498 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=0.567" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.665 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=6e-37 ; Q/S_length_ratio=0.879" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.361 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=1.274" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.561 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=6e-34 ; Q/S_length_ratio=0.891" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.435 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=0.490" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.354 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=4e-32 ; Q/S_length_ratio=1.120" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.424 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=7e-31 ; Q/S_length_ratio=0.964" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.344 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=2e-30 ; Q/S_length_ratio=0.440" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.348 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=7e-30 ; Q/S_length_ratio=0.975" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.378 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=8e-30 ; Q/S_length_ratio=1.693" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DIK4|L0DIK4_SINAD ; ALN/Q_length_ratio=0.387 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4459 PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=0.552" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.533 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=0.877" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.544 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=2e-29 ; Q/S_length_ratio=1.078" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.533 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=3e-29 ; Q/S_length_ratio=1.224" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DQ81|L0DQ81_SINAD ; ALN/Q_length_ratio=0.467 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7511 PE=4 SV=1 ; EVALUE=6e-29 ; Q/S_length_ratio=0.625" /note="Pfam_scan:hit_1 (35..103); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71; EVALUE:6e-08; BITSCORE: 32.1" /note="Pfam_scan:hit_2 (128..181); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:3.9e-08; BITSCORE: 32.6" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSARLRLPSL LPALDDRALL SRFTEQHDQP AFEQLVKRHS RLVFGVCRRT VRDAHLAEDA 61 FQAVFLVLAR NPRGAAEATS VGGWLFGVAR RIGLAARRHE QRREKREQKA PTEQRIEETP 121 QTDFNDVLRV LDEELAAIPD EPRAALVACF LEERTHDEAA RELGWSLSTL RRRLDRGKEL 181 LRSRLARRGV TLAVGLLTGA LASPARATTL APAPSPTSVA LATEALKRGI GTKLWATTVG 241 VVLAVSGIAF GVAYEANSPP ISPLDPVAER SEAPKAQFDV APAPHAVAKP WVTVSGRIVF 301 PKERAIPNPR LVPTNGIQDA EVWKSFAPLR YEDTIINDKN RGIANVVVWL RPDSDDRKAS 361 FPREKIRPLL VDPEAQEHHV LAVAGQFLPR TLAVRAGDRV TFTNRLKVPT NIRYTAATSD 421 MASTVREFNV LVANDTSRTS EPLPELHSPD SFRSTVHPWM TGFVWAFDHP YFAVTDASGR 481 FTIENAPAGK WRLVAWHEVV GFLGSAPGRL GEKVTIPESR AGTLELDPRE FESRGWPAKK //