LOCUS VTR98428.1 397 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana Xylose isomerase domain-containing protein TIM barrel OS=Rhodothermus marinus SG0.5JP17-172 GN=Rhom172_1705 PE=4 SV=1: AP_endonuc_2: AP_endonuc_2_N protein. ACCESSION LR593886-6737 PROTEIN_ID VTR98428.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_02780" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|G2SFA0|G2SFA0_RHOMR ; ALN/Q_length_ratio=0.801 ; DESCRIPTION=Xylose isomerase domain-containing protein TIM barrel OS=Rhodothermus marinus SG0.5JP17-172 GN=Rhom172_1705 PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.171" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|D0MJF9|D0MJF9_RHOM4 ; ALN/Q_length_ratio=0.801 ; DESCRIPTION=Xylose isomerase domain protein TIM barrel OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) GN=Rmar_1733 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.171" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|M5RBT6|M5RBT6_9PLAN ; ALN/Q_length_ratio=0.824 ; DESCRIPTION=Sugar phosphate isomerase/epimerase OS=Rhodopirellula maiorica SM1 GN=RMSM_06122 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.199" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|J0KTQ8|J0KTQ8_9BURK ; ALN/Q_length_ratio=0.814 ; DESCRIPTION=Sugar phosphate isomerase/epimerase OS=Acidovorax sp. CF316 GN=PMI14_00603 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.178" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|F4LWL0|F4LWL0_TEPAE ; ALN/Q_length_ratio=0.814 ; DESCRIPTION=Xylose isomerase domain-containing protein TIM barrel OS=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) GN=TepiRe1_0785 PE=4 SV=1 ; EVALUE=5e-34 ; Q/S_length_ratio=1.207" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|G8QRQ3|G8QRQ3_SPHPG ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=Sugar phosphate isomerase/epimerase OS=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) GN=SpiGrapes_1012 PE=4 SV=1 ; EVALUE=9e-33 ; Q/S_length_ratio=1.203" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|U1MUH1|U1MUH1_9MICO ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=AP endonuclease OS=Agrococcus pavilionensis RW1 GN=L332_14305 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.192" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|N9ZC21|N9ZC21_9FIRM ; ALN/Q_length_ratio=0.814 ; DESCRIPTION=Xylose isomerase OS=[Clostridium] bolteae 90B8 GN=HMPREF1097_03092 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.207" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|F2ATI6|F2ATI6_RHOBT ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=Xylose isomerase domain-containing protein OS=Rhodopirellula baltica WH47 GN=RBWH47_05616 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.189" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|I2F721|I2F721_9THEM ; ALN/Q_length_ratio=0.816 ; DESCRIPTION=Sugar phosphate isomerase/epimerase OS=Mesotoga prima MesG1.Ag.4.2 GN=Theba_2090 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=1.203" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|Q7US81|Q7US81_RHOBA ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB4654 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=1.189" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|K5CAM7|K5CAM7_RHOBT ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=Xylose isomerase domain-containing protein OS=Rhodopirellula baltica SH28 GN=RBSH_04336 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=1.189" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5BDZ7|M5BDZ7_9MICO ; ALN/Q_length_ratio=0.788 ; DESCRIPTION=Uncharacterized protein OS=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 GN=CMN_02734 PE=4 SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=1.125" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M5E4G4|M5E4G4_9FIRM ; ALN/Q_length_ratio=0.821 ; DESCRIPTION=Inosose isomerase OS=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 GN=HSACCH_02372 PE=4 SV=1 ; EVALUE=7e-32 ; Q/S_length_ratio=1.207" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L7CRI6|L7CRI6_RHOBT ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=Xylose isomerase domain-containing protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_00406 PE=4 SV=1 ; EVALUE=1e-31 ; Q/S_length_ratio=1.189" /note="Pfam_scan:hit_1 (41..333); Pfam:PF01261.19:AP_endonuc_2; Pfam_type:Domain;HMM_aln_Length:128; HMM_Length:213; EVALUE:2.1e-12; BITSCORE: 46.7" /note="Pfam_scan:hit_2 (341..394); Pfam:PF07582.7:AP_endonuc_2_N; Pfam_type:Family;HMM_aln_Length:52; HMM_Length:55; EVALUE:1.4e-11; BITSCORE: 43.7" BEGIN 1 MGFAQTVDSE GKPVHRPGKG SYHQIGLVRG QFGGVPEGEW IKFIAGAGFD GWEEASWELD 61 LRRCDTDAGA AEYAKERVAL AKQHGMEIFT VATHLQGQVL GDEPSAKTLN FCSGKGEAKA 121 AYKAWRAAGN NPPRTDPFFV PAEVGKLMHA EAKKDLLAAT RYAGHLSKLQ NRKVALPGFV 181 GSPAHCWSHW FLFPPLPSSM EGYDIPDVWK VSLELIAERF GDVWKLCKEY GVTFDLECHP 241 SERAMGDLES AGDYISFMNN AGFEGTVGFN LDGSHMEWQN VSVIQFIREY AKYIHCAHVK 301 GVQVEREHCR GGLLGGHRWM GHWTNGWKFV TPGTARDANS LEEIFIELNR VGFEGAVSIE 361 WEDNDADKFS GAKAALANCR KADLPPSWGK HDDALKG //