LOCUS VTR98371.1 172 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana histone family protein dna-binding protein : Histone family protein DNA-binding protein OS= Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1271 PE=3 SV=1: Bac_DNA_binding protein. ACCESSION LR593886-6718 PROTEIN_ID VTR98371.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_02970" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|D5SUQ3|D5SUQ3_PLAL2 ; ALN/Q_length_ratio=0.930 ; DESCRIPTION=Histone family protein DNA-binding protein OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1271 PE=3 SV=1 ; EVALUE=4e-35 ; Q/S_length_ratio=1.006" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGH7|L0DGH7_SINAD ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=Bacterial nucleoid DNA-binding protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3716 PE=3 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.203" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DGZ5|L0DGZ5_SINAD ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=Bacterial nucleoid DNA-binding protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4460 PE=3 SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=1.376" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|D2QWH5|D2QWH5_PIRSD ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=Histone family protein DNA-binding protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3114 PE=3 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=0.956" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A6CAS4|A6CAS4_9PLAN ; ALN/Q_length_ratio=0.523 ; DESCRIPTION=Probable DNA-binding protein HU OS=Planctomyces maris DSM 8797 GN=PM8797T_23841 PE=3 SV=1 ; EVALUE=3e-31 ; Q/S_length_ratio=1.162" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A4A2Z0|A4A2Z0_9PLAN ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=Probable DNA-binding protein HU OS=Blastopirellula marina DSM 3645 GN=DSM3645_01736 PE=3 SV=1 ; EVALUE=5e-31 ; Q/S_length_ratio=1.082" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|E8R2S7|E8R2S7_ISOPI ; ALN/Q_length_ratio=0.523 ; DESCRIPTION=Histone family protein DNA-binding protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_3009 PE=3 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=1.365" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|F0SMC9|F0SMC9_PLABD ; ALN/Q_length_ratio=0.779 ; DESCRIPTION=Histone family protein DNA-binding protein OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4537 PE=3 SV=1 ; EVALUE=3e-30 ; Q/S_length_ratio=1.265" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|X0T0W4|X0T0W4_9ZZZZ ; ALN/Q_length_ratio=0.483 ; DESCRIPTION=Marine sediment metagenome DNA, contig: S01H1_L02847 OS=marine sediment metagenome GN=S01H1_09142 PE=4 SV=1 ; EVALUE=7e-28 ; Q/S_length_ratio=1.313" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|K5DN58|K5DN58_RHOBT ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=DNA-binding protein HU OS=Rhodopirellula baltica SH28 GN=RBSH_00654 PE=3 SV=1 ; EVALUE=1e-27 ; Q/S_length_ratio=1.237" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M2AM62|M2AM62_9PLAN ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=DNA-binding protein HU OS=Rhodopirellula europaea 6C GN=RE6C_01034 PE=3 SV=1 ; EVALUE=1e-27 ; Q/S_length_ratio=1.237" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M5SAU1|M5SAU1_9PLAN ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=DNA-binding protein HU OS=Rhodopirellula europaea SH398 GN=RESH_06176 PE=3 SV=1 ; EVALUE=1e-27 ; Q/S_length_ratio=1.237" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|Q7UUH9|Q7UUH9_RHOBA ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=Probable DNA-binding protein HU OS=Rhodopirellula baltica (strain SH1) GN=hup PE=3 SV=1 ; EVALUE=1e-27 ; Q/S_length_ratio=1.237" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|F2AYW4|F2AYW4_RHOBT ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=DNA-binding protein HU OS=Rhodopirellula baltica WH47 GN=RBWH47_04700 PE=3 SV=1 ; EVALUE=1e-27 ; Q/S_length_ratio=1.237" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L7CCU4|L7CCU4_RHOBT ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=Histone-like bacterial DNA-binding protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_04590 PE=3 SV=1 ; EVALUE=1e-27 ; Q/S_length_ratio=1.237" /note="Pfam_scan:hit_1 (1..99); Pfam:PF00216.16:Bac_DNA_binding; Pfam_type:Domain;HMM_aln_Length:89; HMM_Length:90; EVALUE:3.9e-25; BITSCORE: 87.6" /note="GO_domain:GO:0003677" BEGIN 1 MTKKEIVKTI CDRANHEKLI PKHSLTQLAT KEIVQWTFEA IIATLVQEGR IELRNFGVFE 61 VKQRRPRKAR NPRTGDPVNV EAKNVVTFQP GKMMEEQVKK STKIAEVKKK KPRKSKADKA 121 ARNAEPKTAP APIAPEPSAN GNGTVLTETA SVPAVVSAAV KSVAEPVTSD AT //