LOCUS VTR98286.1 572 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-6690 PROTEIN_ID VTR98286.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_03250" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.481 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=4e-37 ; Q/S_length_ratio=1.793" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.554 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=4e-37 ; Q/S_length_ratio=1.149" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.444 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-36 ; Q/S_length_ratio=0.932" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.519 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.142" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.470 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=5e-34 ; Q/S_length_ratio=1.021" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.446 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=0.641" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.365 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=0.958" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.451 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=5e-32 ; Q/S_length_ratio=1.349" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.427 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=1.000" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.507 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=0.815" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.663 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=0.944" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.278 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=5e-31 ; Q/S_length_ratio=1.139" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.357 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=7e-31 ; Q/S_length_ratio=1.187" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.264 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=5e-30 ; Q/S_length_ratio=0.790" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.455 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=2e-29 ; Q/S_length_ratio=1.032" /note="Pfam_scan:hit_1 (42..113); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71; EVALUE:3.3e-08; BITSCORE: 33.0" /note="Pfam_scan:hit_2 (130..183); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:46; HMM_Length:54; EVALUE:1.3e-09; BITSCORE: 37.3" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MTTTVSTGLR RVAARLNPDT APDGELLGRF LEHRDEAAFT VLVRRHAALV LGTCRRVLGN 61 ATDADDAFQA AFVVLVRKAP ALADRVCVAN FLYGIAFHTA LKAKAMAAKR KTREARALAP 121 APRPDQSELL SALDEELAKL PEKYREPVVR CELEGRPRRE VADALGVAEG TISSRLTTAH 181 RLLEKRLRSR GFSAGALALL FAAPTVTASD TLADSTVRAV TDPPQTIAQL ASEVTKMMLL 241 HKLGIGTTAF ALVIALAAVA GATIPRPTAT APESAPAVPH FAPVAVAAPG PPGPEPAWKT 301 EFRKAYGLKD GELVRRVPVP FPECRVEYFR NQIRELYHSR KIDPPAKEVN RDYTDHFTKF 361 GWKDNWTDDR LTAHSTPVKP EDGAPLGRLL EMATAFTQPR TDADADLLET KVTGDWVVRA 421 NADPAKVAAA LETILRKECE VKVSLSVQDV EREVWVLAGK FASNPLPDRK VNMIEVYASE 481 LTDRKTGGGG TGSLQEMATH VEGFVEMPIV IGKVDGAPKH VEWHYNYRSP FTAQQHAEDH 541 DPETVLKNVA AQTGLTVKKE KMKIKVLVVK KG //