LOCUS VTR98003.1 437 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana diaminopimelate decarboxylase : Diaminopimelate decarboxylase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=lysA PE=3 SV=1: Orn_Arg_deC_N: Orn_DAP_Arg_deC protein. ACCESSION LR593886-6581 PROTEIN_ID VTR98003.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_04340" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|D5SXN8|D5SXN8_PLAL2 ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=lysA PE=3 SV=1 ; EVALUE=1e-172 ; Q/S_length_ratio=0.978" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|E8R4Y3|E8R4Y3_ISOPI ; ALN/Q_length_ratio=0.973 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=lysA PE=3 SV=1 ; EVALUE=1e-168 ; Q/S_length_ratio=0.926" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A6CE75|A6CE75_9PLAN ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Planctomyces maris DSM 8797 GN=lysA PE=3 SV=1 ; EVALUE=1e-167 ; Q/S_length_ratio=1.033" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|F0SQC0|F0SQC0_PLABD ; ALN/Q_length_ratio=0.968 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=lysA PE=3 SV=1 ; EVALUE=1e-162 ; Q/S_length_ratio=1.019" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|I3IQC9|I3IQC9_9PLAN ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=Diaminopimelate decarboxylase OS=planctomycete KSU-1 GN=lysA PE=3 SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=1.009" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|Q1Q5N0|Q1Q5N0_9BACT ; ALN/Q_length_ratio=0.977 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Candidatus Kuenenia stuttgartiensis GN=lysa PE=3 SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=1.019" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|B5YL42|B5YL42_THEYD ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=lysA PE=3 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=1.045" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M5PWX8|M5PWX8_DESAF ; ALN/Q_length_ratio=0.950 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfovibrio africanus PCS GN=lysA PE=3 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=1.040" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|F3Z2K8|F3Z2K8_DESAF ; ALN/Q_length_ratio=0.950 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfovibrio africanus str. Walvis Bay GN=lysA PE=3 SV=1 ; EVALUE=1e-136 ; Q/S_length_ratio=1.040" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|B8DJI8|B8DJI8_DESVM ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=lysA PE=3 SV=1 ; EVALUE=1e-133 ; Q/S_length_ratio=1.050" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|T2GCA2|T2GCA2_DESGI ; ALN/Q_length_ratio=0.952 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfovibrio gigas DSM 1382 = ATCC 19364 GN=lysA PE=3 SV=1 ; EVALUE=1e-133 ; Q/S_length_ratio=1.048" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|C6BUL1|C6BUL1_DESAD ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=lysA PE=3 SV=1 ; EVALUE=1e-130 ; Q/S_length_ratio=1.061" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|Q2LTA2|Q2LTA2_SYNAS ; ALN/Q_length_ratio=0.943 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Syntrophus aciditrophicus (strain SB) GN=lysA PE=3 SV=1 ; EVALUE=1e-130 ; Q/S_length_ratio=1.023" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|G2H3S5|G2H3S5_9DELT ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfovibrio sp. A2 GN=lysA PE=3 SV=1 ; EVALUE=1e-130 ; Q/S_length_ratio=1.050" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|A0A068JMV8|A0A068JMV8_9DELT ; ALN/Q_length_ratio=0.950 ; DESCRIPTION=Diaminopimelate decarboxylase OS=Desulfonatronum thiodismutans GN=lysA PE=3 SV=1 ; EVALUE=1e-128 ; Q/S_length_ratio=1.048" /note="Pfam_scan:hit_1 (33..281); Pfam:PF02784.11:Orn_Arg_deC_N; Pfam_type:Domain;HMM_aln_Length:244; HMM_Length:251; EVALUE:9.3e-51; BITSCORE: 172.4" /note="Pfam_scan:hit_2 (246..411); Pfam:PF00278.17:Orn_DAP_Arg_deC; Pfam_type:Domain;HMM_aln_Length:114; HMM_Length:116; EVALUE:3e-18; BITSCORE: 65.6" /note="GO_domain:GO:0016829" /note="GO_domain:GO:0006520" /note="GO_domain:GO:0009058" /note="Enzyme_Code:EC:4.1.1.20" BEGIN 1 MDHFDYRDRT LYCEDVPVPE LAEKYGTPLY VYSQATLLDR LKEVQTAFTE VKPVICYSVK 61 ANGNLSIARL MGQNGAGFDV TSQGEFQRAL KAGPTGSKIV FAGVGKSDAE IEFALKNDVF 121 LFDVESEQEL HAIGAVAQKL GVKAPVALRV NPDLPPKTHV KTDTSVKGVK FGLDIETIVD 181 VAKGVVGHPG LAVVGLHMHL GSPILKAEPY RMGAEKGVAL IKQFRAQGHD IKFLNMGGGF 241 GINYRKDEAK PASAFAEVII PAVKESGCQL ILEPGRFIAG NAAILLSRVV FTKSTGGKHY 301 IIQDAAMNDL IRPTLYGSFH RIWPVTPSTE VPVRPDVNGD PDDPNPFRAM PNCFTQDVVG 361 PVCESGDYLA KDRPLPGVKR GDLLAVFSAG AYGMAMASNY NSRVRAAEVL VTGRTHRLIR 421 RRETFADLVA CEEDCLT //