LOCUS VTR97049.1 661 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40 protein. ACCESSION LR593886-6100 PROTEIN_ID VTR97049.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_09150" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.410 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=1.077" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.366 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=7e-38 ; Q/S_length_ratio=1.559" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.374 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=1.327" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.418 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.499" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.284 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=5e-35 ; Q/S_length_ratio=1.156" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.408 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=9e-35 ; Q/S_length_ratio=1.180" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.464 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=1.091" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.324 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.740" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.269 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=1.317" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.315 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=5e-33 ; Q/S_length_ratio=1.371" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.325 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=5e-33 ; Q/S_length_ratio=0.600" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DIK4|L0DIK4_SINAD ; ALN/Q_length_ratio=0.307 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4459 PE=4 SV=1 ; EVALUE=6e-33 ; Q/S_length_ratio=0.675" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.290 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=1e-32 ; Q/S_length_ratio=0.539" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.304 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=4e-32 ; Q/S_length_ratio=2.072" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.399 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=0.913" /note="Pfam_scan:hit_1 (39..112); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71; EVALUE:1e-08; BITSCORE: 34.6" /note="Pfam_scan:hit_2 (133..186); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54; EVALUE:7.5e-12; BITSCORE: 44.5" /note="Pfam_scan:hit_3 (503..540); Pfam:PF00400.27:WD40; Pfam_type:Repeat;HMM_aln_Length:33; HMM_Length:39; EVALUE:0.013; BITSCORE: 15.4" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MTIADTLRRL GCSAPDPRSD GELLHGFASA RDEGAFTELL RRFGPTVYGV CRRVLGNVPD 61 ADDAFQAVFL VLARRAPELR TPAGIGNWLY GVAVRTATKA RIMNAKRRAR QRSDRTSRSV 121 SYPPPVAPDP DTRAAIDAEL AALPDRYRAA LVACDLNGRT RREAARELGW PEGTVAARLA 181 HARRLLAARL TRRGVTLTAG ALAAVPVPAS VAAETVAAVR ALHATGTAAL ISPAAQRLSD 241 EATRSVTTIP ERWLVWCGLV LALVAGGAVL RATPDHDPLL PAPQFVAAPV PRAAEVEWRE 301 AQPIELSDGG RVTSVAFAPG GKTFAVCRDS GDIDFFDPVT RKHQQRMAVR HDPTVNANTE 361 VGTSTVLAFR PTPHSALGDV FAVTHKNGVI FGTTTIGLLA DNAAAVTGVP GNWALKGLDP 421 HALVWVPGAD GSACVAVTNG AVTTAAPKAA AGMEPQFPGE DKFRHKPTPL APLPGSRLLT 481 TFKAVEDTGT SLQLHIVPLT GPNKRVKLTG HRARPTCAAA APDGKTLVTG DERGEVIVWD 541 GETGEATSRV VLGAGLVQLA LAPDERTLAA VCVRPLKVAG GERTELELYL LDARSLRAKP 601 KPCWTTGDKP LPGRLEGTAS LAFSSNGKTL LVAVADPFAR TTPAELPKSM GVRVWERVPK 661 K //