LOCUS VTR96847.1 426 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma ecf subfamily protein : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4095 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5999 PROTEIN_ID VTR96847.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_10160" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DG08|L0DG08_SINAD ; ALN/Q_length_ratio=0.977 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4095 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.984" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|I2GDS0|I2GDS0_9BACT ; ALN/Q_length_ratio=0.969 ; DESCRIPTION=RNA polymerase sigma factor OS=Fibrisoma limi BUZ 3 GN=BN8_01016 PE=3 SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.012" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|B9XQD3|B9XQD3_PEDPL ; ALN/Q_length_ratio=0.977 ; DESCRIPTION=Putative RNA polymerase, sigma-24 subunit, ECF subfamily OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD1132 PE=4 SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=0.968" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|F4KR94|F4KR94_HALH1 ; ALN/Q_length_ratio=0.953 ; DESCRIPTION=Putative RNA polymerase, sigma-24 subunit, ECF subfamily OS=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) GN=Halhy_6465 PE=4 SV=1 ; EVALUE=1e-110 ; Q/S_length_ratio=1.036" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|B4CZK9|B4CZK9_9BACT ; ALN/Q_length_ratio=0.972 ; DESCRIPTION=Putative RNA polymerase, sigma-24 subunit, ECF subfamily OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_2097 PE=4 SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=1.002" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A0A023BT62|A0A023BT62_9FLAO ; ALN/Q_length_ratio=0.965 ; DESCRIPTION=Uncharacterized protein OS=Aquimarina sp. 22II-S11-z7 GN=ATO12_19530 PE=4 SV=1 ; EVALUE=1e-103 ; Q/S_length_ratio=1.002" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|A0A098XYN3|A0A098XYN3_9CYAN ; ALN/Q_length_ratio=0.972 ; DESCRIPTION=RNA polymerase subunit sigma-24 OS=Tolypothrix bouteillei VB521301 GN=DA73_35030 PE=4 SV=1 ; EVALUE=1e-101 ; Q/S_length_ratio=1.017" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|B1KFA5|B1KFA5_SHEWM ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=Putative RNA polymerase, sigma 70 family subunit OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=Swoo_2367 PE=4 SV=1 ; EVALUE=1e-99 ; Q/S_length_ratio=1.087" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|G8TP93|G8TP93_NIAKG ; ALN/Q_length_ratio=0.958 ; DESCRIPTION=Putative RNA polymerase, sigma-24 subunit, ECF subfamily OS=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) GN=Niako_0301 PE=4 SV=1 ; EVALUE=7e-99 ; Q/S_length_ratio=0.995" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|I6B1K4|I6B1K4_9BACT ; ALN/Q_length_ratio=0.977 ; DESCRIPTION=RNA polymerase sigma factor OS=Opitutaceae bacterium TAV1 GN=OpiT1DRAFT_05714 PE=3 SV=1 ; EVALUE=6e-98 ; Q/S_length_ratio=0.938" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|W0JAR2|W0JAR2_9BACT ; ALN/Q_length_ratio=0.979 ; DESCRIPTION=RNA polymerase sigma factor OS=Opitutaceae bacterium TAV5 GN=OPIT5_30740 PE=3 SV=1 ; EVALUE=1e-97 ; Q/S_length_ratio=0.936" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|R9PH27|R9PH27_AGAAL ; ALN/Q_length_ratio=0.890 ; DESCRIPTION=Putative sigma factor OS=Agarivorans albus MKT 106 GN=AALB_0638 PE=4 SV=1 ; EVALUE=2e-97 ; Q/S_length_ratio=1.024" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|A3YHN4|A3YHN4_9GAMM ; ALN/Q_length_ratio=0.960 ; DESCRIPTION=Putative sigma factor OS=Marinomonas sp. MED121 GN=MED121_03090 PE=4 SV=1 ; EVALUE=2e-97 ; Q/S_length_ratio=0.993" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|F8ECF8|F8ECF8_RUNSL ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=Putative RNA polymerase, sigma-24 subunit, ECF subfamily OS=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) GN=Runsl_1333 PE=4 SV=1 ; EVALUE=4e-97 ; Q/S_length_ratio=1.024" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|K6Y223|K6Y223_9ALTE ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=RNA polymerase sigma 70 family subunit OS=Glaciecola arctica BSs20135 GN=GARC_1005 PE=4 SV=1 ; EVALUE=7e-97 ; Q/S_length_ratio=1.005" /note="Pfam_scan:hit_1 (12..81); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71; EVALUE:1.9e-09; BITSCORE: 36.9" /note="Pfam_scan:hit_2 (113..166); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:2e-09; BITSCORE: 36.7" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSEPRALVEH FFRHEFGRLV AVLTRSLGVR RLDLVEDVVQ AALVQALESW ARRGVPEDPA 61 GWLYRTARNL AVDALRREQT YARVLPHLSD GAEQVAAPPE VHFADEIGDE PLRLLFVSCH 121 EEVPAESRVA FALRTLCGFS SAEIARGLLT TEANVQKRIE RARDRLRDLD IDFEAPATPQ 181 LRARLDAVLS VIYLLFSQGC HATHADVPIR RDLCDEARRL AQMLAAHPVG DVPVVHALLA 241 LMCFHAARFD ARVALDGGIV LFEQQDRSTW NWGDVREGME WLARAAAGDE LTRYHVEAGI 301 AWEHCRASSV ADTDWHRIAA GYDVLDRIAP SPIHALNRAV AEVYLRGPQA GLDRLAAVAP 361 EDVPARYPGW YAVIGELHSR LGQHPAAERA WLEALRLTSA SADQEFLRRR LADCRRALGL 421 ATIARS //