LOCUS VTR96787.1 773 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5969 PROTEIN_ID VTR96787.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_10460" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ; ALN/Q_length_ratio=0.884 ; DESCRIPTION=Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=0.667" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.475 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=1.543" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.339 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=1.753" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.270 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=5e-35 ; Q/S_length_ratio=2.423" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.457 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=5e-34 ; Q/S_length_ratio=1.276" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=1.823" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.268 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=0.630" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.387 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=4e-33 ; Q/S_length_ratio=1.101" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.250 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=4e-32 ; Q/S_length_ratio=1.295" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.325 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=1e-31 ; Q/S_length_ratio=1.380" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.356 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=1.255" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.406 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=1.552" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.411 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=0.866" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.358 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-30 ; Q/S_length_ratio=1.259" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.282 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=3e-30 ; Q/S_length_ratio=1.395" /note="Pfam_scan:hit_1 (45..113); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:71; EVALUE:1.7e-09; BITSCORE: 37.1" /note="Pfam_scan:hit_2 (135..188); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54; EVALUE:2.9e-14; BITSCORE: 52.2" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MAGTRLAALV RRLRRDVTPD LGACSDADLL ARFAATRDNA AFELLVWRHG AMVLSACRRV 61 LGHQQDAEDA FQAAFLVLAR KAATVRSGVT VPAWLHRVAV RIAQRAAGKR RTTVALVAEP 121 PARPAPDAVE QNELRGLLDA EIDRLREPYR RAFVLCYLEG LSNADAARVL GCPVGTIESR 181 LSAARRELRH RLSRQRVALP VGILALLVTN SVLGSDAVAT ATRAGVLAAD SGLRAAIGIV 241 GEPAVKLAER GLTMTKTRTW VVAVLGVALI GLVTGVGWAN RPIDSPVEPE VAVAPESAEP 301 AVAPPPTPVG ENAAKTEAWP LAKQIQWQGG NLFGVAPDGK SIFLLYNSNQ IYGISLVGKA 361 GTSIATSENK ILAAAVSPDG KYLATAEGAN GVKLRDATTG RVIEALWPEG ELPAVQVTFV 421 PDGTKLIALC TRTPSGGFAG RPSGPGSIEQ EREFQQLARV SVWDVATRKE LGHPAQTDKA 481 KLGGLPFYTL AGHGRFMLKS QPVYGANAEG EQVIKSRRIT ITDAVSGVAS KPIEVVGATL 541 APMRSEPLSP DGKTLVLSDY TQHELRFLDA ETGKDRFRVP AFRRPIKTVA FSPDGKLVAA 601 ATGISGGARR DDTIAAPSEV VIWDTATGRE RARLTDKETI RDYFAIAFSP DGSFLVAQAE 661 GSSKQITIWG HPPTPEPEPA KPVAKAAGGA EAPARFQGLF RDLAGEGVTD SRRIETLFLA 721 ALGRFPTDVE ARTLVSQLAR RDDKAAALRD LLGTLVETTE FKKHAEELGR LAK //