LOCUS VTR96344.1 184 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase subunit sigma-24 : RNA polymerase, sigma-70 region OS=Stigmatella aurantiaca (strain DW4/3-1) GN=STAUR_2151 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5645 PROTEIN_ID VTR96344.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_13700" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|E3FZU0|E3FZU0_STIAD ; ALN/Q_length_ratio=0.848 ; DESCRIPTION=RNA polymerase, sigma-70 region OS=Stigmatella aurantiaca (strain DW4/3-1) GN=STAUR_2151 PE=4 SV=1 ; EVALUE=1e-15 ; Q/S_length_ratio=0.906" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|Q08U01|Q08U01_STIAD ; ALN/Q_length_ratio=0.848 ; DESCRIPTION=Sigma factor, ECF subfamily, putative OS=Stigmatella aurantiaca (strain DW4/3-1) GN=STIAU_2198 PE=4 SV=1 ; EVALUE=2e-15 ; Q/S_length_ratio=0.786" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A0A085WIR0|A0A085WIR0_9DELT ; ALN/Q_length_ratio=0.853 ; DESCRIPTION=RNA polymerase sigma factor RpoE OS=Hyalangium minutum GN=DB31_8056 PE=4 SV=1 ; EVALUE=2e-14 ; Q/S_length_ratio=0.920" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A0A085XC17|A0A085XC17_9DELT ; ALN/Q_length_ratio=0.853 ; DESCRIPTION=RNA polymerase sigma factor RpoE OS=Enhygromyxa salina GN=DB30_3767 PE=4 SV=1 ; EVALUE=2e-14 ; Q/S_length_ratio=0.920" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A0A069DJM5|A0A069DJM5_9BACL ; ALN/Q_length_ratio=0.946 ; DESCRIPTION=RNA polymerase sigma factor OS=Paenibacillus sp. TCA20 GN=TCA2_5107 PE=3 SV=1 ; EVALUE=2e-14 ; Q/S_length_ratio=0.974" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A0A084SEJ8|A0A084SEJ8_9DELT ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=RNA polymerase sigma 70 OS=Cystobacter violaceus Cb vi76 GN=Q664_51830 PE=4 SV=1 ; EVALUE=4e-13 ; Q/S_length_ratio=0.968" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|E0I8D9|E0I8D9_9BACL ; ALN/Q_length_ratio=0.913 ; DESCRIPTION=RNA polymerase sigma factor OS=Paenibacillus curdlanolyticus YK9 GN=PaecuDRAFT_1890 PE=3 SV=1 ; EVALUE=2e-12 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|F8CCP1|F8CCP1_MYXFH ; ALN/Q_length_ratio=0.853 ; DESCRIPTION=RNA polymerase sigma-70 factor OS=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) GN=LILAB_01840 PE=4 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.915" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|A0A0A2UKP9|A0A0A2UKP9_9BACL ; ALN/Q_length_ratio=0.946 ; DESCRIPTION=RNA polymerase subunit sigma-24 OS=Paenibacillus sp. MAEPY1 GN=P363_0114165 PE=4 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|W4BCP5|W4BCP5_9BACL ; ALN/Q_length_ratio=0.946 ; DESCRIPTION=RNA polymerase sigma factor OS=Paenibacillus sp. FSL R5-192 GN=C161_02960 PE=3 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|A0A0A2TZ85|A0A0A2TZ85_9BACL ; ALN/Q_length_ratio=0.946 ; DESCRIPTION=RNA polymerase subunit sigma-24 OS=Paenibacillus sp. MAEPY2 GN=P364_0117575 PE=4 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|W4BUE9|W4BUE9_9BACL ; ALN/Q_length_ratio=0.946 ; DESCRIPTION=RNA polymerase sigma factor OS=Paenibacillus sp. FSL H7-689 GN=C170_21824 PE=3 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|H8MS25|H8MS25_CORCM ; ALN/Q_length_ratio=0.853 ; DESCRIPTION=RNA polymerase sigma-70 factor OS=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) GN=algU PE=4 SV=1 ; EVALUE=4e-12 ; Q/S_length_ratio=0.920" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|X6E0L9|X6E0L9_9RHIZ ; ALN/Q_length_ratio=0.772 ; DESCRIPTION=RNA polymerase sigma70 OS=Mesorhizobium sp. LNHC220B00 GN=X739_27290 PE=4 SV=1 ; EVALUE=2e-11 ; Q/S_length_ratio=1.070" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|X6F8F5|X6F8F5_9RHIZ ; ALN/Q_length_ratio=0.772 ; DESCRIPTION=RNA polymerase sigma70 OS=Mesorhizobium sp. LNHC209A00 GN=X738_17320 PE=4 SV=1 ; EVALUE=5e-11 ; Q/S_length_ratio=1.070" /note="Pfam_scan:hit_1 (13..81); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:71; EVALUE:6.3e-09; BITSCORE: 35.3" /note="Pfam_scan:hit_2 (115..167); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54; EVALUE:4.3e-11; BITSCORE: 42.1" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MLTNEQRQRF GAWVAAVGPR AVAYARSLVH DESRADDVVQ ECFYRLLRRA DAYDLERDGV 61 KILFKAISNL CINQATREKA LLSLNSAPQA DGEPVPIADP VALRPEQILQ HRELEQAIRD 121 ALQVLSPLQR AAIELRALGM SKEEIGDALG VSATNAGVLV HRGRQALARE LESLRSVADF 181 DEKV //