LOCUS VTR96280.1 605 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5581 PROTEIN_ID VTR96280.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_14340" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.431 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=5e-55 ; Q/S_length_ratio=1.215" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.460 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=9e-53 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.441 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=7e-49 ; Q/S_length_ratio=1.205" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.512 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=9e-49 ; Q/S_length_ratio=0.549" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.350 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=1e-47 ; Q/S_length_ratio=1.897" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.506 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=2e-47 ; Q/S_length_ratio=0.677" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.534 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=3e-45 ; Q/S_length_ratio=0.998" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.468 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=4e-43 ; Q/S_length_ratio=1.208" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.398 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=1e-42 ; Q/S_length_ratio=1.255" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.481 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=0.836" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.463 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=4e-42 ; Q/S_length_ratio=1.372" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DDY6|L0DDY6_SINAD ; ALN/Q_length_ratio=0.415 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2787 PE=4 SV=1 ; EVALUE=1e-41 ; Q/S_length_ratio=1.108" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=2e-41 ; Q/S_length_ratio=1.427" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.463 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=9e-41 ; Q/S_length_ratio=1.360" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.511 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=7e-40 ; Q/S_length_ratio=0.862" /note="Pfam_scan:hit_1 (46..114); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:71; EVALUE:9.5e-10; BITSCORE: 37.9" /note="Pfam_scan:hit_2 (141..192); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:48; HMM_Length:54; EVALUE:5.2e-13; BITSCORE: 48.2" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MATDPLAGLL HRLRRTACAG DGGEWPDEQL LKDFIAHRSE TAVAALVRRH GPMVWGVCRR 61 VLRRYHDAED AFQATFLVLV RRAPAIAAPE LLANWLYGVA HQTARKARAT AAKRNGRERP 121 TAEGPEPVAL EREAWGDLWP VLDQELSRLP DTYRSVLVLC DLEGKTRKEA ARDTGLPEGT 181 VASRLARARG MLAARLAQRG VALSSGAIVA LLAKSTASAR VPEAVIASTL VVTHVCTGAN 241 GTVPGAVSAL ADGVLNSMTA IKLKIAVALA LVLGALATGA TLLNHPGAAA GDDRPVAVRE 301 NPPAAGNPAA PPPKREKEPL TAWGPEVGGL RAGLSIRPDA KRAYSYGETI TLFVRVRNTS 361 KETVKFQYIR QFLDETPPTT IGADGKEFRQ AGLAVLGMHG PVDVSLKPGE EIELESRMAG 421 GAKRAGAPGW RYELRPAGSR GRGATEEHPL FVGRGKVGLQ YERVLGNSSS GGLQLDPALS 481 KLATGKLELE VGDAPEPARL DAVLRVQADT KKGIGIRFEH PGTADQSFTS DEYRYAVLDK 541 DGVQVNGALM HLPLAIHTTH LPKTERAVTD YSDYTLDPRK LKSGEEYYVV VTVRNLTALA 601 KFKSD //