LOCUS VTR96273.1 601 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5574 PROTEIN_ID VTR96273.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_14410" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.439 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=1e-44 ; Q/S_length_ratio=1.417" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.463 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=4e-42 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.474 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=4e-42 ; Q/S_length_ratio=1.073" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.488 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=2e-41 ; Q/S_length_ratio=1.884" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.416 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-39 ; Q/S_length_ratio=1.007" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.394 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=6e-37 ; Q/S_length_ratio=0.992" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.486 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=0.856" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.433 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=1.085" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=0.545" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.321 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=0.490" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.406 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=0.976" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.641 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=1.207" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.468 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=1.051" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.717 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=5e-33 ; Q/S_length_ratio=1.351" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.414 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=8e-33 ; Q/S_length_ratio=0.830" /note="Pfam_scan:hit_1 (72..145); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:64; HMM_Length:71; EVALUE:2.8e-12; BITSCORE: 46.0" /note="Pfam_scan:hit_2 (164..217); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54; EVALUE:7.4e-08; BITSCORE: 31.7" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MRPPQKTWTP DRFDWNYFTA YPTARRVVIV AQTTEMIRAL TRGMAAEAST EPDPELIRRF 61 LGSGGEDVFE ILVRRHGPMV YRVCRRVAGH EQDAEDAFQA TFLVLARNLR ALRHVPSLAS 121 WLHGVARRVA LKAKARVAAL KRREQRAAAP ESTAHVDPAW SDVGAALDEE LGRLPERWRL 181 PLVLCYLEAR TQDEAARELG WGKSTLRRRL TEARAALAAR LAQRGVWPTV LAGVLVSDCT 241 SPAALPRELV GPTVGAAAAI ASGRPGPTVA AGVSNLTEGV FTVSRLKLKV AALVAAVLVL 301 GAGAPLRVSS AELPAGPAGV EEIRTADGPG PQKADTKPAD ELERWQGRWR VTTAAINGKD 361 RKDERIGLAE IVVTGKKVTL RFRHGSPTEG ASVDGELELI PIKAKKGALA DPGFIVHMLI 421 PVTGNYHFTN GQLVICYYEP GSEEGAERPA GFGSQEGSKR ELYRLERVVD KEPPAQLTPK 481 KRAQAPGEFG EGPEPAVPDL SGRWQGDEWG QIELAMTKRG TYVGTYTDTF GPVKGSVTLE 541 WVPREQRFHG TWGEGKDRFG TISVRLHGRE IRGAFTTDPA SRISPGSPAL SDLKWVPQPT 601 R //