LOCUS VTR96072.1 700 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5373 PROTEIN_ID VTR96072.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_16420" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.387 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=3e-44 ; Q/S_length_ratio=1.140" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.439 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=9e-43 ; Q/S_length_ratio=1.397" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.337 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=4e-41 ; Q/S_length_ratio=1.224" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.266 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=5e-41 ; Q/S_length_ratio=1.452" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.430 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=0.635" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.351 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=1.651" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.416 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=0.784" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.419 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=7e-37 ; Q/S_length_ratio=1.587" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.297 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=2.194" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.304 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.406" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.346 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=5e-34 ; Q/S_length_ratio=1.173" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.254 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=1.250" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.226 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=4e-33 ; Q/S_length_ratio=1.394" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.400 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=9e-33 ; Q/S_length_ratio=1.155" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.323 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=0.570" /note="Pfam_scan:hit_1 (39..107); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71; EVALUE:4.6e-09; BITSCORE: 35.7" /note="Pfam_scan:hit_2 (135..186); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:2.4e-10; BITSCORE: 39.6" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MNPARSAEIL RQLERTDAPD ADLLVRFVAD RDTGAFEELV HRHGALVLGV CLRVTGHPQD 61 AEDAFQATFL VLARRAATVR KRDRLWSWLY GTAFRVAWRA RRAARRRRVR EVTVSQLPEP 121 HAPEPAPTRP ELAPVLDEEL AALPTHYREA IVLCDLRGAS RQEAAVLLGV PEGTLSSRLA 181 NGRKRLAARL TRRGISLAVV ALPGALTDAQ AGITVPAELV TQTCGLVADF AANGAVPGPL 241 ARLTGRGALV RKTLVFGGLM VAVVASAVFA AVPSDNAPPN EPPKPPVVVQ KPDAAPQPQA 301 DPKPGDQPMF ASEPKLRGVA DLSINGFEMP VWNATGTHLA ITADQVVTPI ERDNTGRPKT 361 RRIIRVCSFS NRSVSYGQDI YLRDHEGFAG LTADGAVVTA LNENGLISGQ HELRFWAPEK 421 GTGNIQLTKT VEIAPADLRM YDYAFAPDWK TYRTIAWQYD GERPTKIEVL EIDAVTQKPA 481 KSLLKVDFGS AYYVRLSANG KRFAVVDQEV TKVTIFDVDR GEKVSEHTFR GGKITELPKV 541 LPFASFGGPA SPPPSASLVF SSNGKQLVVA RTIGQTVVLN ADTGDVLPLL EGTKEAHVSP 601 EPCAFSSDNR LLVATGTNYK LVTRKEPGGR AREQTGWERG GAFLTVWDTR TGKVLKTWKS 661 GNGARVAFNP VRPILAILEY NGESKSRLGF WDFAAEVEKK //