LOCUS VTR95973.1 739 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-5274 PROTEIN_ID VTR95973.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_17410" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.391 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=1.204" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.449 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=1.533" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.401 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=6e-38 ; Q/S_length_ratio=1.484" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.380 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=1.219" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.350 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=1e-36 ; Q/S_length_ratio=1.320" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.344 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.292" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.292 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=2.317" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.402 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=4e-33 ; Q/S_length_ratio=1.743" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.338 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=4e-33 ; Q/S_length_ratio=1.053" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.398 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=1e-32 ; Q/S_length_ratio=0.828" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.406 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=0.602" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.355 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=5e-32 ; Q/S_length_ratio=1.238" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.356 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=1.661" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.410 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=0.671" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.359 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=2e-30 ; Q/S_length_ratio=0.775" /note="Pfam_scan:hit_1 (38..108); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:71; EVALUE:3.7e-07; BITSCORE: 29.6" /note="Pfam_scan:hit_2 (129..182); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:3.6e-12; BITSCORE: 45.5" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MNAILTKLNR LSTAPGPSSD GALLTAFLAG DQSAFAVLVH RYAGLVFASC QRILHHRQDA 61 EDALQATFLV LARRAGDIWP REAVASWLFG VARRVSLRAR AVRTRRSTRE CPLEDVATTE 121 PARPDSDLAE VVHRIVCRLP EIYRSAVIAC DLQGLSRKEA AERLGWSEGT LSGRLARARE 181 LLATRLRRVG LSLPAGGLAA VCAGPESAPA ATIQSTIDLA IGAGPGVSAP VAALTEGVVS 241 SMALFKLKAM TAVVFAACAL GFGAFAASGS GSGDGAGTQP GQSQKSSAPV PVAGKLGEPP 301 AKGTVQRGPR LGLAQEELLI LIEELKAANK QNVDPEALAR LRAQIEVIGR LLDPNDAMMT 361 PVPPVKPGAD LDPLQGSWRV TSVKDGSKSL KIEPSDPWVI EISGSTMKMP YREATGAWKQ 421 RDYKIAVEFA LQKPEAIMQR NTIDLIAPRE PVGRGIYEFT ASEFACMQCH KASDNLRTLV 481 TGRFPNENVL CEPALKDKAT KHAAGLRLAF TIDGKRPTKF GGEGVIVFEM VRADAKPVGT 541 DDERWRELKS RLDALGKQAG DERASDRVFA QLWALVESTQ LESQQARLDL AHANAQLQTT 601 KKAAELAETR WAGANQRWQL AVREYEDAKS ARAAKDKPVP AVAPGGVAPA GSVFTIHIRT 661 LTAPEKVINV KATGKETVLD GLLQAIDDVS IMTGTVSTWL VRGKEVLPID LAGIKNGETK 721 TNYVLKAGDQ LFVQVKAEK //