LOCUS VTR95963.1 486 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna terminal phosphate cyclase : RNA- splicing ligase RtcB (Fragment) OS=uncultured planctomycete GN=HGMM_F01A04C27 PE=3 SV=1: RtcB protein. ACCESSION LR593886-5264 PROTEIN_ID VTR95963.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_17510" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|D6CJZ2|D6CJZ2_9BACT ; ALN/Q_length_ratio=0.992 ; DESCRIPTION=RNA-splicing ligase RtcB OS=uncultured bacterium GN=JG3_0090 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.004" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DKC5|L0DKC5_SINAD ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA-splicing ligase RtcB OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5138 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.994" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|W8NTZ2|W8NTZ2_9EURY ; ALN/Q_length_ratio=0.981 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Thermococcus nautili GN=BD01_1004 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.015" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|E1YC30|E1YC30_9DELT ; ALN/Q_length_ratio=0.953 ; DESCRIPTION=RNA-splicing ligase RtcB OS=uncultured Desulfobacterium sp. GN=N47_G34480 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.019" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|B8DYS7|B8DYS7_DICTD ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA-splicing ligase RtcB OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=Dtur_0127 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.000" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|A0A075WCM0|A0A075WCM0_ARCFL ; ALN/Q_length_ratio=0.984 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Archaeoglobus fulgidus DSM 8774 GN=AFULGI_00009450 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.012" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|B5ID78|B5ID78_ACIB4 ; ALN/Q_length_ratio=0.994 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Aciduliprofundum boonei (strain DSM 19572 / T469) GN=rtcB PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.004" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|D5MFV6|D5MFV6_9BACT ; ALN/Q_length_ratio=0.959 ; DESCRIPTION=RNA-splicing ligase RtcB OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1577 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.012" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|B6YVC4|B6YVC4_THEON ; ALN/Q_length_ratio=0.981 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Thermococcus onnurineus (strain NA1) GN=TON_0714 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.015" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|B5YBP3|B5YBP3_DICT6 ; ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA-splicing ligase RtcB OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=DICTH_1853 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.000" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|E8R433|E8R433_ISOPI ; ALN/Q_length_ratio=0.998 ; DESCRIPTION=RNA-splicing ligase RtcB OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1031 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.994" /note="BLAST_uniprot:hit_13 ; ACCESSION=O29399 ; ALN/Q_length_ratio=0.984 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=rtcB PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.008" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|B5IDC7|B5IDC7_ACIB4 ; ALN/Q_length_ratio=0.994 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Aciduliprofundum boonei (strain DSM 19572 / T469) GN=ABOONEI_1529 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.004" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0HM66|L0HM66_ACIS0 ; ALN/Q_length_ratio=0.994 ; DESCRIPTION=tRNA-splicing ligase RtcB OS=Aciduliprofundum sp. (strain MAR08-339) GN=AciM339_1019 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.004" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|H5S894|H5S894_9BACT ; ALN/Q_length_ratio=0.914 ; DESCRIPTION=RNA-splicing ligase RtcB (Fragment) OS=uncultured planctomycete GN=HGMM_F01A04C27 PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.095" /note="Pfam_scan:hit_1 (27..486); Pfam:PF01139.12:RtcB; Pfam_type:Family;HMM_aln_Length:419; HMM_Length:420; EVALUE:1.7e-142; BITSCORE: 475.3" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0016874" /note="Enzyme_Code:EC:6.5.1" BEGIN 1 MKSGFTGPLE SIGCCCHRIP KSYKTGMRVD GHIYANDKLL EAIRKDQAPD QVANVAMLPG 61 IQVASIAMPD IHWGYGFCIG GVCATDPEEG GVISPGGVGY DINCGVRFIK TNLYLDDVKH 121 HMKKLVKALF YTVPSGAGRT GRYKFDATET RRLMGEGPRF VIDRGLGVAR DLDHTEANGR 181 IDDADPHQVS DHAVKRGAEQ CGTLGSGNHF LEVQVVDSVF DADVAKVFGL ELNQICVMIH 241 SGSRGLGYQV CDDSLAAFRN CSTKYGFELP DRQLACAPVD SPEGRKYIAA MRAAANYGFC 301 NRQLLMQQAR EVFAGVFGRS WEDLGMEQLY DVAHNIAKLE EHTVDGKKKK VWVHRKGATR 361 AFPAGHPEVP EKYRTVGQPV IIPGDMGRAS WVLVGSQGAM EKTFGTTCHG AGRAMSRTAA 421 LKDGAGRRID RELEHKGVIA MASSRNGLAE EQPKAYKNVD DVVDVVHEAD LSRRVARMRP 481 LGVIKG //