LOCUS VTR95561.1 611 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana transcription termination factor rho : Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rho PE=3 SV=1: Rho_N: Rho_RNA_bind: ATP-synt_ab protein. ACCESSION LR593886-4862 PROTEIN_ID VTR95561.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_21530" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|Q1PUV0|Q1PUV0_9BACT ; ALN/Q_length_ratio=0.707 ; DESCRIPTION=Transcription termination factor Rho OS=Candidatus Kuenenia stuttgartiensis GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.349" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|E8QZ11|E8QZ11_ISOPI ; ALN/Q_length_ratio=0.722 ; DESCRIPTION=Transcription termination factor Rho OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.924" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|B9M0K8|B9M0K8_GEODF ; ALN/Q_length_ratio=0.674 ; DESCRIPTION=Transcription termination factor Rho OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.472" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|F0SGU6|F0SGU6_PLABD ; ALN/Q_length_ratio=0.715 ; DESCRIPTION=Transcription termination factor Rho OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.323" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|A6CAX4|A6CAX4_9PLAN ; ALN/Q_length_ratio=0.702 ; DESCRIPTION=Transcription termination factor Rho OS=Planctomyces maris DSM 8797 GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.281" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|B3E624|B3E624_GEOLS ; ALN/Q_length_ratio=0.674 ; DESCRIPTION=Transcription termination factor Rho OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.472" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|D2R072|D2R072_PIRSD ; ALN/Q_length_ratio=0.709 ; DESCRIPTION=Transcription termination factor Rho OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.180" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|C6E7G7|C6E7G7_GEOSM ; ALN/Q_length_ratio=0.674 ; DESCRIPTION=Transcription termination factor Rho OS=Geobacter sp. (strain M21) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.472" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|A0A081C8X7|A0A081C8X7_9BACT ; ALN/Q_length_ratio=0.686 ; DESCRIPTION=Transcription termination factor Rho OS=bacterium UASB270 GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.408" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|D5SVQ2|D5SVQ2_PLAL2 ; ALN/Q_length_ratio=0.704 ; DESCRIPTION=Transcription termination factor Rho OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.300" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|I3IJW5|I3IJW5_9PLAN ; ALN/Q_length_ratio=0.705 ; DESCRIPTION=Transcription termination factor Rho OS=planctomycete KSU-1 GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.376" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|B5EDS7|B5EDS7_GEOBB ; ALN/Q_length_ratio=0.674 ; DESCRIPTION=Transcription termination factor Rho OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.472" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|Q3A126|Q3A126_PELCD ; ALN/Q_length_ratio=0.674 ; DESCRIPTION=Transcription termination factor Rho OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.472" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A3ZQQ2|A3ZQQ2_9PLAN ; ALN/Q_length_ratio=0.712 ; DESCRIPTION=Transcription termination factor Rho OS=Blastopirellula marina DSM 3645 GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.189" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DJE7|L0DJE7_SINAD ; ALN/Q_length_ratio=0.740 ; DESCRIPTION=Transcription termination factor Rho OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rho PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.950" /note="Pfam_scan:hit_1 (195..239); Pfam:PF07498.7:Rho_N; Pfam_type:Family;HMM_aln_Length:42; HMM_Length:43; EVALUE:4e-09; BITSCORE: 36.0" /note="Pfam_scan:hit_2 (241..318); Pfam:PF07497.7:Rho_RNA_bind; Pfam_type:Domain;HMM_aln_Length:76; HMM_Length:78; EVALUE:1.8e-37; BITSCORE: 126.8" /note="Pfam_scan:hit_3 (346..557); Pfam:PF00006.20:ATP-synt_ab; Pfam_type:Family;HMM_aln_Length:211; HMM_Length:215; EVALUE:7.4e-43; BITSCORE: 146.5" /note="GO_domain:GO:0016887" /note="GO_domain:GO:0003723" /note="GO_domain:GO:0043167" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="Enzyme_Code:EC:3.6.1" /note="Enzyme_Code:EC:3.6.1.3" /note="Enzyme_Code:EC:3.6.1.15" BEGIN 1 MSDTKPEVTK PTRTPRSRAR KTAEPAAPPP PPAPVASEVA EDEGFAAGIV DEVPAKPEPA 61 PPVVTPPPAV IPPPPPAPEV RERRAEEVRE RRTESRESAR ADRGSRSERV PDPREAPRAE 121 TPLPAPRAEP PPPAPRAELS PPAPRVELPP PVLPPVAPPA VTPAPLRVDP HEQGFDAETN 181 SRYEEIKRGN TYITELQHMT IAQLQKAAKD EGIPREEYVG LKKQDLVYRI LRELTKANGL 241 MFGEGTLEVL PDGFGFLRSP DYNYLPCPDD IYISPSQIRR FGLRTGAVVA GQTRPPKENE 301 RYFALLRVEA INYAEPDLLT QKVVFDDLTP LHPERRLKLE TTPDELNTRV IDLITPIGKG 361 QRGLIVAPPR TGKTVLLQKM ANSIIQNHPE CYVIVLLIDE RPEEVTDMSR TVKGPRVEVV 421 SSTFDEPPER HVQVSEMVIE KAKRLVEYGT DVVILLDSIT RLARAYNTVS PGSGKLLSGG 481 LDATALYKPK RFFGAARNID EGGSLTILAT ALVDTGSKMD EVIFEEFKGT GNMEVHLERR 541 MVDRRVYPAI DVNASGTRKE ELLRGEDELR LVHIMHRILA DMNPVEAMEL LLKQLSKYKT 601 NAEFLTSVTL T //