LOCUS VTR95545.1 707 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-4846 PROTEIN_ID VTR95545.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_21690" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.390 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=1.151" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.308 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=0.576" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.262 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=5e-40 ; Q/S_length_ratio=1.467" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.427 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=1.411" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.389 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-39 ; Q/S_length_ratio=0.642" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.365 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=1.262" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.403 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=1.603" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.325 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=1.667" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.423 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=0.792" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.371 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=6e-36 ; Q/S_length_ratio=2.216" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.378 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.236" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.260 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=6e-35 ; Q/S_length_ratio=1.167" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=6e-35 ; Q/S_length_ratio=1.007" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.304 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.420" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.328 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=0.977" /note="Pfam_scan:hit_1 (39..107); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71; EVALUE:1e-08; BITSCORE: 34.6" /note="Pfam_scan:hit_2 (135..186); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:6.7e-08; BITSCORE: 31.8" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MNATRPAEIL RQLEQSGATD VELLTHFAST KDAVAFETLV RRHGALVLGV CRRVTRNPHD 61 AEDAFQATFL VLAQKAGALR NAALLGNWLY GVVFRIACRA RRSVGRRRAR EVTMANLPEY 121 PVPDSGRVMP ELAPILDEEL AALAGCYREA IVLCDLRGAS REEAAAALGV PEGTLSSRLA 181 NGRKKLAVRL AKRGIVLSVA LLPSVVFELQ AATILPNELL TKTCGLIADY SAIGAVPSPL 241 AKLTQGGFTV RKTFVFGLVL TVAVTGAVFA ATPRENALPP DPPKVPAVVE LPAEQPKPKE 301 EAKTVEKATT FATTPKLRHS FDLSVGWGQP WFGTRPARTS RSLGWNTVEL GAVRGTVRLF 361 GCSGPQAILN QLPVILTRGA HLVAVAPNGK GIITDLREYK LISGHHHLAY WSEGNNQPPG 421 GGGEGGSGPA SLVKPMLVIS KTVKLDSTET RGYTFAAEGK TFRTRAWEDA ATSGPENLEV 481 LEVDATNGKI IKSLMKVKYG ESTLSPDGKR LAVLDNEMTK VTVYDVDRGE KLSESTLPTD 541 STVELPGGKT VDIPIHPEPQ LLKFSPDGRR LVVSRGIGRS RVLNTDTGAT LPRLEGTALA 601 EVHFDSHAFS GDGRLLAAMR RVYKISVKNP GPKAGRGAVE PMSLSGNDWI LTVWDTQTGK 661 VLKSWKSSSG VRWAFCPAKP LLAVLEENGV GNTRVGFWDF AAEVEKK //