LOCUS VTR95516.1 201 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase sigma-70 ecf-like protein : DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA- 1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7395 PE= 4 SV=1: Sigma70_ECF protein. ACCESSION LR593886-4817 PROTEIN_ID VTR95516.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_21980" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DPY7|L0DPY7_SINAD ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7395 PE=4 SV=1 ; EVALUE=6e-53 ; Q/S_length_ratio=1.010" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DJN8|L0DJN8_SINAD ; ALN/Q_length_ratio=0.990 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4904 PE=4 SV=1 ; EVALUE=1e-50 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D9Z6|L0D9Z6_SINAD ; ALN/Q_length_ratio=1.030 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1052 PE=4 SV=1 ; EVALUE=1e-45 ; Q/S_length_ratio=0.953" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|M5U7U6|M5U7U6_9PLAN ; ALN/Q_length_ratio=0.965 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sallentina SM41 GN=RSSM_01032 PE=4 SV=1 ; EVALUE=4e-44 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|M5T897|M5T897_9PLAN ; ALN/Q_length_ratio=0.965 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02117 PE=4 SV=1 ; EVALUE=3e-43 ; Q/S_length_ratio=0.863" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|F0SMJ3|F0SMJ3_PLABD ; ALN/Q_length_ratio=0.990 ; DESCRIPTION=Uncharacterized protein OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0125 PE=4 SV=1 ; EVALUE=6e-43 ; Q/S_length_ratio=0.885" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M5U100|M5U100_9PLAN ; ALN/Q_length_ratio=0.980 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sallentina SM41 GN=RSSM_03451 PE=4 SV=1 ; EVALUE=6e-38 ; Q/S_length_ratio=0.807" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|F2ATN4|F2ATN4_RHOBT ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula baltica WH47 GN=RBWH47_03907 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.914" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M5SVC9|M5SVC9_9PLAN ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_06786 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.801" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|Q7UGA3|Q7UGA3_RHOBA ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB8027 PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.866" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|K5E2B9|K5E2B9_RHOBT ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula baltica SH28 GN=RBSH_04631 PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=0.914" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L7CDC2|L7CDC2_RHOBT ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_04430 PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=0.939" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M2AUF9|M2AUF9_9PLAN ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula europaea 6C GN=RE6C_05647 PE=4 SV=1 ; EVALUE=7e-36 ; Q/S_length_ratio=0.918" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M5SEH2|M5SEH2_9PLAN ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula europaea SH398 GN=RESH_03429 PE=4 SV=1 ; EVALUE=6e-35 ; Q/S_length_ratio=0.918" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M5RWF3|M5RWF3_9PLAN ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula maiorica SM1 GN=RMSM_03346 PE=4 SV=1 ; EVALUE=8e-35 ; Q/S_length_ratio=0.848" /note="Pfam_scan:hit_1 (4..200); Pfam:PF07638.6:Sigma70_ECF; Pfam_type:Family;HMM_aln_Length:179; HMM_Length:185; EVALUE:3.3e-39; BITSCORE: 134.4" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSAEGSITRF LGPLRAGDEG AVQKLWEAYY ERLVSLARKK LGSAPRRAAD EEDAALSAFD 61 NFCRGAVEGR FPRLLDRDDL WQILLVLTVR KTANLLKREN ALKRGGRAQP IALSAGNANG 121 DDTVLAELID REPEPGVVVE VAEECRRLLA KLDDPELRAV AVWKMEGHTN EEIAVKLGRS 181 LGSVERKLRV IRTLWGQELP P //