LOCUS VTR95479.1 349 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana ribosomal large subunit pseudouridine synthase : Pseudouridine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4872 PE=3 SV=1: S4: PseudoU_synth_2 protein. ACCESSION LR593886-4780 PROTEIN_ID VTR95479.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_22350" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DK55|L0DK55_SINAD ; ALN/Q_length_ratio=0.917 ; DESCRIPTION=Pseudouridine synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4872 PE=3 SV=1 ; EVALUE=1e-110 ; Q/S_length_ratio=1.039" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|A6C0W7|A6C0W7_9PLAN ; ALN/Q_length_ratio=0.960 ; DESCRIPTION=Pseudouridine synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_05295 PE=3 SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=1.020" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|D5SWB8|D5SWB8_PLAL2 ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=Pseudouridine synthase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_3699 PE=3 SV=1 ; EVALUE=1e-101 ; Q/S_length_ratio=1.012" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|E8QY33|E8QY33_ISOPI ; ALN/Q_length_ratio=0.989 ; DESCRIPTION=Pseudouridine synthase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1438 PE=3 SV=1 ; EVALUE=2e-98 ; Q/S_length_ratio=0.808" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|D2R7T3|D2R7T3_PIRSD ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=Pseudouridine synthase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2843 PE=3 SV=1 ; EVALUE=9e-94 ; Q/S_length_ratio=0.983" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|F0SHU7|F0SHU7_PLABD ; ALN/Q_length_ratio=0.914 ; DESCRIPTION=Pseudouridine synthase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_1973 PE=3 SV=1 ; EVALUE=6e-91 ; Q/S_length_ratio=1.039" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M5S695|M5S695_9PLAN ; ALN/Q_length_ratio=0.900 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula maiorica SM1 GN=RMSM_01354 PE=3 SV=1 ; EVALUE=6e-90 ; Q/S_length_ratio=0.954" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L7CIW9|L7CIW9_RHOBT ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica SWK14 GN=RBSWK_02267 PE=3 SV=1 ; EVALUE=4e-88 ; Q/S_length_ratio=1.048" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|K5DHI6|K5DHI6_RHOBT ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica SH28 GN=RBSH_02403 PE=3 SV=1 ; EVALUE=4e-88 ; Q/S_length_ratio=1.048" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|Q7UHX8|Q7UHX8_RHOBA ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica (strain SH1) GN=rluD PE=3 SV=1 ; EVALUE=4e-88 ; Q/S_length_ratio=1.045" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|F2AVK9|F2AVK9_RHOBT ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica WH47 GN=RBWH47_02268 PE=3 SV=1 ; EVALUE=4e-88 ; Q/S_length_ratio=1.048" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M5SBC9|M5SBC9_9PLAN ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula europaea SH398 GN=RESH_00689 PE=3 SV=1 ; EVALUE=6e-88 ; Q/S_length_ratio=1.045" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M2AM93|M2AM93_9PLAN ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula europaea 6C GN=RE6C_01013 PE=3 SV=1 ; EVALUE=1e-87 ; Q/S_length_ratio=1.045" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|T0L4Z2|T0L4Z2_9BACT ; ALN/Q_length_ratio=0.908 ; DESCRIPTION=Pseudouridine synthase OS=candidate division ZIXI bacterium RBG-1 GN=RBG1_1C00001G0106 PE=3 SV=1 ; EVALUE=1e-84 ; Q/S_length_ratio=1.077" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|U5CPV8|U5CPV8_THEYO ; ALN/Q_length_ratio=0.834 ; DESCRIPTION=Pseudouridine synthase OS=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 GN=O163_12905 PE=3 SV=1 ; EVALUE=6e-84 ; Q/S_length_ratio=1.129" /note="Pfam_scan:hit_1 (37..85); Pfam:PF01479.20:S4; Pfam_type:Domain;HMM_aln_Length:46; HMM_Length:48; EVALUE:2.8e-12; BITSCORE: 45.8" /note="Pfam_scan:hit_2 (112..269); Pfam:PF00849.17:PseudoU_synth_2; Pfam_type:Family;HMM_aln_Length:160; HMM_Length:164; EVALUE:4.4e-32; BITSCORE: 111.1" /note="GO_domain:GO:0003723" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0016853" /note="Enzyme_Code:EC:5.4.99.12" BEGIN 1 MSDELEDDLI PEPAPVTSSV RFREPLDLLV MVKSEGMRLD QYVLLHLGAD FSRSVVQRAI 61 EAGGVTLNGK PITKPSYKVR KHDRLHVAMP EPTHEIPVPE DIPLDILYQD EWLAIVNKPS 121 DMVVHPAKGN WSGTLVNALQ WHFREHLSTG AGHLRAGIVH RLDKDTSGVI LVAKDDMTHR 181 DLAMQFESRK VFKEYVAIAA GELERDSDYI EGALKMHPYD RLKMIVSTDP DAKHALSYYE 241 VLERFRGFTL VKVQPRTGRT HQIRVHLLHV GCAVLADKIY GGRSQVKLSE LAPNQPSTED 301 EVLLARQALH AFRLRFQHPR TGQWIEAEAP LPPDMRRVLD ALRAHRALK //