LOCUS VTR95216.1 203 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase sigma factor y : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1616 PE=4 SV=1: Sigma70_r2 protein. ACCESSION LR593886-4517 PROTEIN_ID VTR95216.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_24980" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DAW4|L0DAW4_SINAD ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1616 PE=4 SV=1 ; EVALUE=3e-65 ; Q/S_length_ratio=1.015" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|M5SU82|M5SU82_9PLAN ; ALN/Q_length_ratio=0.897 ; DESCRIPTION=RNA polymerase sigma factor Y OS=Rhodopirellula sp. SWK7 GN=RRSWK_07091 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=1.103" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DKJ5|L0DKJ5_SINAD ; ALN/Q_length_ratio=0.931 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5656 PE=4 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=0.940" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|H5SIK4|H5SIK4_9BACT ; ALN/Q_length_ratio=0.961 ; DESCRIPTION=RNA polymerase sigma factor Y OS=uncultured planctomycete GN=HGMM_F33C03C33 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.967" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|K5D9M4|K5D9M4_RHOBT ; ALN/Q_length_ratio=0.951 ; DESCRIPTION=RNA polymerase sigma factor Y OS=Rhodopirellula baltica SH28 GN=RBSH_01246 PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.971" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|Q7ULK6|Q7ULK6_RHOBA ; ALN/Q_length_ratio=0.951 ; DESCRIPTION=Probable RNA polymerase sigma factor Y OS=Rhodopirellula baltica (strain SH1) GN=sigY PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=0.971" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|F2AK44|F2AK44_RHOBT ; ALN/Q_length_ratio=0.961 ; DESCRIPTION=RNA polymerase sigma factor Y OS=Rhodopirellula baltica WH47 GN=RBWH47_03830 PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M2ALH1|M2ALH1_9PLAN ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=Extracytoplasmic function alternative sigma factor OS=Rhodopirellula europaea 6C GN=RE6C_05745 PE=4 SV=1 ; EVALUE=6e-37 ; Q/S_length_ratio=1.041" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L7CMG6|L7CMG6_RHOBT ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=Extracytoplasmic function alternative sigma factor OS=Rhodopirellula baltica SWK14 GN=RBSWK_01838 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.041" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|M2ATB8|M2ATB8_9PLAN ; ALN/Q_length_ratio=0.936 ; DESCRIPTION=RNA polymerase sigma factor Y OS=Rhodopirellula europaea 6C GN=RE6C_05964 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.046" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M5S4M0|M5S4M0_9PLAN ; ALN/Q_length_ratio=0.961 ; DESCRIPTION=RNA polymerase sigma factor Y OS=Rhodopirellula europaea SH398 GN=RESH_02838 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=0.971" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|F2AR27|F2AR27_RHOBT ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=RNA polymerase sigma factor Y OS=Rhodopirellula baltica WH47 GN=RBWH47_01148 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.041" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|K5D0M6|K5D0M6_RHOBT ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=Protein containing RNA polymerase sigma-70 domain protein OS=Rhodopirellula baltica SH28 GN=RBSH_04739 PE=4 SV=1 ; EVALUE=9e-36 ; Q/S_length_ratio=1.041" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5S5S2|M5S5S2_9PLAN ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Rhodopirellula europaea SH398 GN=RESH_02679 PE=4 SV=1 ; EVALUE=9e-36 ; Q/S_length_ratio=0.958" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M5T7M6|M5T7M6_9PLAN ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=RNA polymerase sigma-70 domain protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02221 PE=4 SV=1 ; EVALUE=4e-35 ; Q/S_length_ratio=1.025" /note="Pfam_scan:hit_1 (33..104); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71; EVALUE:3.1e-11; BITSCORE: 42.7" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPRPDDQPAD RASTSLTLLQ RARAREPGAW DRLWALYGPL VTHWCATARV RPADVEDVRQ 61 EVFLSVARAL GEFRRDRAGD TFRGWLRTIT RNVLSTHFRR GARQPVGAGG SEAQARLHEL 121 ADPNVELPDE DPPGEVRGVY RRALELVRGE FEEHTWQMFW QNVVEERDAA AVAEQFGVST 181 AAVRKARSRV LRRLKEEVGD AIE //