LOCUS VTR95098.1 512 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-4399 PROTEIN_ID VTR95098.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_26160" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.965 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=3e-39 ; Q/S_length_ratio=0.537" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.816 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=0.465" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.434 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=9e-37 ; Q/S_length_ratio=1.605" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.588 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-36 ; Q/S_length_ratio=0.834" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.615 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=0.729" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DKL4|L0DKL4_SINAD ; ALN/Q_length_ratio=0.943 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5058 PE=4 SV=1 ; EVALUE=8e-36 ; Q/S_length_ratio=0.534" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DE85|L0DE85_SINAD ; ALN/Q_length_ratio=0.578 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3292 PE=4 SV=1 ; EVALUE=8e-33 ; Q/S_length_ratio=0.977" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DHB1|L0DHB1_SINAD ; ALN/Q_length_ratio=0.994 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4458 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=0.526" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.578 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=3e-31 ; Q/S_length_ratio=0.914" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.553 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=6e-31 ; Q/S_length_ratio=0.858" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DIK4|L0DIK4_SINAD ; ALN/Q_length_ratio=1.033 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4459 PE=4 SV=1 ; EVALUE=3e-30 ; Q/S_length_ratio=0.523" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DQ81|L0DQ81_SINAD ; ALN/Q_length_ratio=0.988 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7511 PE=4 SV=1 ; EVALUE=4e-30 ; Q/S_length_ratio=0.593" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DI62|L0DI62_SINAD ; ALN/Q_length_ratio=1.021 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4348 PE=4 SV=1 ; EVALUE=6e-30 ; Q/S_length_ratio=0.510" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.385 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=0.417" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ; ALN/Q_length_ratio=0.354 ; DESCRIPTION=Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=0.442" /note="Pfam_scan:hit_1 (40..109); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:62; HMM_Length:71; EVALUE:8.8e-07; BITSCORE: 28.4" /note="Pfam_scan:hit_2 (135..188); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54; EVALUE:1.8e-07; BITSCORE: 30.4" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSQHALTQIV RKSGELVDEI DAQLIARFVS TRDEAAFRVL VQRHGPVVLA ALRQVLADPA 61 GIDDSFQATF LVLFKRATRS APLSVPLRGW LFGVAHRVAV RCRADRHRCT VRETEAARRA 121 RPTTELPDLS WREATEILHQ ELNALPDKYR LPLLLCGVQG LTRDEAADQL GATAGALRGH 181 LDRGLALLEK RLTRRGIVLS AGWLALVIDS SRAVEVPPAR LIDLAARVAS GQCTRAVIAL 241 AAGVLPVNKL LKPFALTVTA LLIVAGIGFG FVPTAPQVDE KPVPKAAASA PRAETTAPEP 301 APKEDTKELR TITGKVLDAT GKPVPAELSL MWFTGPPQPL GRAGADGAFA LTVPFKRNGS 361 GGRFVAKAPG HGMDFRPHGL SSVPESMSPT ADWTLKLPKE RAIRGRVLDH EGTAVAGATV 421 VANFFSACDT EAAVDRRLEE WAAREYHGTP PSGDRTLWFP DADWTLGSPD ERSPYTATTD 481 KDGRFEIAGT GVNQLVGLRI RVRALRTRNS SP //