LOCUS VTR94983.1 626 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1558 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-4284 PROTEIN_ID VTR94983.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_27310" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0D9N2|L0D9N2_SINAD ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1558 PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=0.697" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.353 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=1.476" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.289 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.420" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.296 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.962" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.289 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=1.299" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.252 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=1.247" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.324 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.257" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.318 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=0.701" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.447 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=4e-32 ; Q/S_length_ratio=1.250" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.372 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=1.049" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.444 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=8e-32 ; Q/S_length_ratio=0.892" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.292 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=5e-31 ; Q/S_length_ratio=1.118" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.375 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=9e-31 ; Q/S_length_ratio=1.094" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.395 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-30 ; Q/S_length_ratio=1.020" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DKL4|L0DKL4_SINAD ; ALN/Q_length_ratio=0.262 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5058 PE=4 SV=1 ; EVALUE=2e-29 ; Q/S_length_ratio=0.653" /note="Pfam_scan:hit_1 (42..110); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71; EVALUE:3.4e-10; BITSCORE: 39.3" /note="Pfam_scan:hit_2 (135..188); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:48; HMM_Length:54; EVALUE:9.6e-11; BITSCORE: 40.9" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPQTVCTAAV NRALRAVHRP TSDGELVERF AATGDSDAFS QLVHRHGAMV LAVCRRITRH 61 HQDAEDAFQA TFLVLARRAG AVNTSRAVAG WLFGVAVNAA REARRRSARR YNRESLTATP 121 PETGRCEPDP DFDIRAVVAE ELAGLPEGYR SLVVACDLQG ESQAAVARRL GLPVGTVYSR 181 LSTARRILAE RLGRRGLGAP ACLVALAAFA ADVEALPPVS DCPSPHVTEL TEAIMRRGFA 241 VRWKLAACAL LASVAVALSG EPPKEKPIVA PAPTAAEESR LILGLGGHVR YLKSDGTEVS 301 RLTGAEVVKA GADMPTRSLS VGLNSDVGLT TTVSEIFGPS GRIAPDGRLP LNTRKGLYML 361 TPGDSLVVKP AKAAAGEGAL FASGNVPYIV AWSPDAKKAI GFRIKRGLFG SVYEHVLIDL 421 AAGTTSELKV PSMHRVVDWS PDGSWFLTIR ENKTWGLEGL YARERVLCKV SADGKTSRAL 481 TPTGGNGPGQ SVVVESAVLS PDGTRVAYQQ WTTTLAQQAK EGPVYCQGLD VVVLDLDRGT 541 RTVVASEPGG KGSGDFLQMN TSFGVRWSPD GSRVGFLYEH REFGTPFIVA WRVGVVNTSG 601 GKVKTVFASD KVDKTPPTAL TTFDWR //