LOCUS VTR94852.1 375 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana ribosomal large subunit pseudouridine synthase d : Pseudouridine synthase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_0906 PE=3 SV=1: PseudoU_synth_2 protein. ACCESSION LR593886-4153 PROTEIN_ID VTR94852.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_28620" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|D2R795|D2R795_PIRSD ; ALN/Q_length_ratio=0.712 ; DESCRIPTION=Pseudouridine synthase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_0906 PE=3 SV=1 ; EVALUE=4e-61 ; Q/S_length_ratio=1.100" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|B5JHH9|B5JHH9_9BACT ; ALN/Q_length_ratio=0.797 ; DESCRIPTION=Pseudouridine synthase OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_3973 PE=3 SV=1 ; EVALUE=1e-55 ; Q/S_length_ratio=1.157" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|D0LGK2|D0LGK2_HALO1 ; ALN/Q_length_ratio=0.781 ; DESCRIPTION=Pseudouridine synthase, RluA family OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) GN=Hoch_0107 PE=4 SV=1 ; EVALUE=6e-52 ; Q/S_length_ratio=1.234" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A0A017T8K6|A0A017T8K6_9DELT ; ALN/Q_length_ratio=0.813 ; DESCRIPTION=Pseudouridine synthase OS=Chondromyces apiculatus DSM 436 GN=CAP_3121 PE=3 SV=1 ; EVALUE=6e-49 ; Q/S_length_ratio=1.008" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A9GHW4|A9GHW4_SORC5 ; ALN/Q_length_ratio=0.645 ; DESCRIPTION=Pseudouridine synthase OS=Sorangium cellulosum (strain So ce56) GN=rluD1 PE=3 SV=1 ; EVALUE=2e-48 ; Q/S_length_ratio=1.053" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|S4XIR3|S4XIR3_SORCE ; ALN/Q_length_ratio=0.651 ; DESCRIPTION=Pseudouridine synthase OS=Sorangium cellulosum So0157-2 GN=SCE1572_00050 PE=3 SV=1 ; EVALUE=4e-45 ; Q/S_length_ratio=1.042" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|A6G5N3|A6G5N3_9DELT ; ALN/Q_length_ratio=0.805 ; DESCRIPTION=Pseudouridine synthase OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_32487 PE=3 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=1.165" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|T0DQ00|T0DQ00_9BACL ; ALN/Q_length_ratio=0.693 ; DESCRIPTION=Pseudouridine synthase OS=Alicyclobacillus acidoterrestris ATCC 49025 GN=N007_02950 PE=3 SV=1 ; EVALUE=6e-39 ; Q/S_length_ratio=1.198" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|H8FZF5|H8FZF5_PEDPE ; ALN/Q_length_ratio=0.592 ; DESCRIPTION=Pseudouridine synthase OS=Pediococcus pentosaceus IE-3 GN=rluD PE=3 SV=1 ; EVALUE=1e-38 ; Q/S_length_ratio=1.276" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|Q03FM4|Q03FM4_PEDPA ; ALN/Q_length_ratio=0.592 ; DESCRIPTION=Pseudouridine synthase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=PEPE_0941 PE=3 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=1.250" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|U5ZJG6|U5ZJG6_PEDPE ; ALN/Q_length_ratio=0.592 ; DESCRIPTION=Pseudouridine synthase OS=Pediococcus pentosaceus SL4 GN=T256_04600 PE=3 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=1.250" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|R0GK74|R0GK74_PEDAC ; ALN/Q_length_ratio=0.595 ; DESCRIPTION=Pseudouridine synthase OS=Pediococcus acidilactici D3 GN=PAD3_0400 PE=3 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.242" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0D6L9|L0D6L9_SINAD ; ALN/Q_length_ratio=0.600 ; DESCRIPTION=Pseudouridine synthase, RluA family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0639 PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.246" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|W7S8H9|W7S8H9_LYSSH ; ALN/Q_length_ratio=0.667 ; DESCRIPTION=Pseudouridine synthase OS=Lysinibacillus sphaericus CBAM5 GN=P799_02995 PE=3 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.238" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|B1HQB5|B1HQB5_LYSSC ; ALN/Q_length_ratio=0.667 ; DESCRIPTION=Pseudouridine synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=Bsph_1458 PE=3 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.238" /note="Pfam_scan:hit_1 (145..307); Pfam:PF00849.17:PseudoU_synth_2; Pfam_type:Family;HMM_aln_Length:160; HMM_Length:164; EVALUE:4.4e-30; BITSCORE: 104.6" /note="GO_domain:GO:0003723" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0016853" /note="Enzyme_Code:EC:5.4.99.12" BEGIN 1 MPPIQFVVDR REAGQTLAAV LKLRFGIPWA RAKRLVEGQH VKVSGQVETD VARRLKLGKR 61 VELATGTVEM KKTSGGKDSK KPEQQKGTVT GNKGKPGEKR PQVPAPRKTA KTAPKAPERR 121 GDRVPPAHPL APSLELDAIV YVDDAVVVVN KPVGLTTMRH KDEADEFGEH GQRFLTKTLA 181 GMLPGLLGAP DRPVTAVHRL DRDTSGLVVF ARTSAAAENL TKQFRKHTTE RRYLALTRGV 241 PKAARIASVL VRDRGDGRRG STTDLIAEDG KRAVTHVSVS ESWGDFALVG CRLETGRTHQ 301 ARIHLGEAGA PLCGETVYDR PINGKPRPDG SGAKRPMLHA TRLGFTHPDT GENVVWEVAP 361 PRDFGDLLIK LRAGR //