LOCUS VTR94829.1 590 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-4130 PROTEIN_ID VTR94829.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_28850" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.446 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=1e-41 ; Q/S_length_ratio=1.392" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.515 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=0.661" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.349 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=5e-37 ; Q/S_length_ratio=1.178" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.315 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=1.850" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.453 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-35 ; Q/S_length_ratio=0.961" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.466 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=1.054" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.451 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=9e-33 ; Q/S_length_ratio=1.326" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.519 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=9e-33 ; Q/S_length_ratio=0.958" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.500 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=9e-33 ; Q/S_length_ratio=1.338" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.676 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=0.974" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.410 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=1.224" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.451 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=1e-30 ; Q/S_length_ratio=0.988" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.500 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=3e-30 ; Q/S_length_ratio=1.185" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DCW6|L0DCW6_SINAD ; ALN/Q_length_ratio=0.331 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2795 PE=4 SV=1 ; EVALUE=4e-30 ; Q/S_length_ratio=1.532" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.439 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=5e-30 ; Q/S_length_ratio=0.840" /note="Pfam_scan:hit_1 (43..111); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71; EVALUE:1.6e-12; BITSCORE: 46.8" /note="Pfam_scan:hit_2 (137..190); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:7.6e-08; BITSCORE: 31.7" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MAASSRGLFG FVARLRPALS ADSDADLLER FVRTADQTAF ASLVQRHGAM VLSVCRRRLG 61 SESDAEDAFQ AVFLALATSA ATIRRRESLS GWLYRVAYQI ALKAAGRRAR HPVAALPTSE 121 VPMPDSQPPS WETDELKAVI DAEVAGLPDK LRAVIVLCLV EGRTNVEAAA ALAVPTGTVD 181 SRLNAARKTL QAKLTRRGVA VGAGVVLEQL LGGPVEAAGP RLTELFASTI SAVLTEAAGP 241 GGGAVSPAVI ELARGVTVMT TNLRVFATLG LVLGLLGSAG AGFYLTAADP DAPKTKSANQ 301 PLAPEVTAAQ PPVAKSATLE SKVDPNSRGE AALLKLVGAG LAPDGVTVAE ILKKIEDETD 361 LIVRVDVDAF RRIGLFGDDA GEEIDASLKT IYETKVHLPR RVEKMPMRDV LADSLAQTRF 421 GSKCTYRVRG DQLVIVPAYV PAFRPGVNPL DHAEDDSAVL TEKMISEHIY GGVVSVSADR 481 KPLSDILADL RKQTGANIVL DPRCESQRPK LPSLTINLND ARLYDALRVI TDMAELKMVY 541 AGNIYYITTV ENAKTFQPPL SRQPILQTPP FTPPLNPQPN AGGAGGMPMR //